RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 KIAA1211LQ6NV74 962 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 MSANTD2Q6P1R3 559 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 SLC29A4Q7RTT9 530 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HSD17B13Q7Z5P4 300 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TAC4Q86UU9 113 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 MCATQ8IVS2 390 aaKnown RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM145Q8NBT3 493 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 OR10Q1Q8NGQ4 319 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HTR3CQ8WXA8 447 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ZBED6CLQ96FA7 236 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 LRR1Q96L50 414 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 FCRL3Q96P31 734 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 RNF157Q96PX1 679 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ATG101Q9BSB4 218 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 THUMPD3Q9BV44 507 aaKnown RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 METTL9Q9H1A3 318 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 KCMF1Q9P0J7 381 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 RCOR3Q9P2K3 495 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 DHCR7Q9UBM7 475 aaKnown RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM238LA0A1B0GVL6 79 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ADM5C9JUS6 153 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PPP6CO00743 305 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 HSPA12AO43301 675 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RAD1O60671 282 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 GATBO75879 557 aaKnown RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SUPT7LO94864 414 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 AKR7A3O95154 331 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 CFHP08603 1231 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 FGF2P09038 288 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 CXCL3P19876 107 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PSMA1P25786 263 aaKnown RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 VIPR1P32241 457 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 WNT7BP56706 349 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MTPNP58546 118 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 C1QTNF8P60827 252 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SNRPFP62306 86 aaKnown RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MAT1AQ00266 395 aaKnown RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 HYAL4Q2M3T9 481 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 LRRC38Q5VT99 294 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 LCLAT1Q6UWP7 414 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 REC114Q7Z4M0 266 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ANKRD46Q86W74 232 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 C4orf19Q8IY42 314 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 CENPLQ8N0S6 344 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SLC43A2Q8N370 569 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MINDY1Q8N5J2 469 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 LINC01465Q8N7H1 131 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF321PQ8N8H1 164 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 L3MBTL4Q8NA19 623 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DNERQ8NFT8 737 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 HMGCLL1Q8TB92 370 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RXFP4Q8TDU9 374 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MRPS24Q96EL2 167 aaKnown RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MISP3Q96FF7 219 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DDOQ99489 341 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 CPNE1Q99829 537 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 IFT27Q9BW83 186 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 B3GNT5Q9BYG0 378 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 BARHL1Q9BZE3 327 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 METTL17Q9H7H0 456 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 NRBP2Q9NSY0 501 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SELENOFO60613 162 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SOX30O94993 753 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SPDEFO95238 335 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 C1QAP02745 245 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DCTP40126 519 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 CD86P42081 329 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 HMGCS2P54868 508 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 BLOC1S1P78537 153 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 GRB14Q14449 540 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MAD2L1BPQ15013 274 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 CDO1Q16878 200 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RNASE12Q5GAN4 147 aaKnown RBP6.57□□□□□ -1.36
VPS13B-205ENST00000493587 GPR153Q6NV75 609 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 RPL13AP3Q6NVV1 102 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ENPP6Q6UWR7 440 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 WASH2PQ6VEQ5 465 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 SLC26A9Q7LBE3 791 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF605Q86T29 641 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM185AQ8NFB2 350 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 GAL3ST3Q96A11 431 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 C3orf49Q96BT1 292 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MFSD14AQ96MC6 490 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 LRFN5Q96NI6 719 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PCYT2Q99447 389 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MGLLQ99685 303 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM43Q9BTV4 400 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 TRIM54Q9BYV2 358 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 IL22Q9GZX6 179 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 MVB12BQ9H7P6 319 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PXMP2Q9NR77 195 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 VAPAQ9P0L0 249 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PHF11Q9UIL8 331 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 ZMYM5Q9UJ78 669 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 PKP3Q9Y446 797 aa6.57□□□□□ -1.36
VPS13B-205ENST00000493587 DNAH12Q6ZR08 3092 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms