RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GLSO94925 669 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 WDR47O94967 919 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CD1EP15812 388 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SAT1P21673 171 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 MSX1P28360 303 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 HNRNPH1P31943 449 aaKnown RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 KCNC1P48547 511 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 ARFIP1P53367 373 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SLC12A2P55011 1212 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 LIM2P55344 173 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TAS2R39P59534 338 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 ATP6V0D1P61421 351 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 PPIAP62937 165 aaKnown RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 DR1Q01658 176 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TFF3Q07654 80 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 BMPR2Q13873 1038 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SLBPQ14493 270 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TGFBIQ15582 683 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 HIST2H2ACQ16777 129 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 MPEG1Q2M385 716 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TMEM35AQ53FP2 167 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 PAGE2BQ5JRK9 111 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TEX35Q5T0J7 233 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 HIST2H2AA3Q6FI13 130 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SULT1C3Q6IMI6 304 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 ABHD17CQ6PCB6 329 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 OPN5Q6U736 354 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 RTL4Q6ZR62 310 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CDH24Q86UP0 819 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CD163Q86VB7 1156 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 DND1Q8IYX4 353 aaKnown RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CLYBLQ8N0X4 340 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SLC35F6Q8N357 371 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 MARVELD2Q8N4S9 558 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SLC15A4Q8N697 577 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TEX9Q8N6V9 391 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 BBOF1Q8ND07 529 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 PTPMT1Q8WUK0 201 aaPredicted RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 ASB15Q8WXK1 588 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 UBE2E3Q969T4 207 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CFAP36Q96G28 342 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 KCNC2Q96PR1 638 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 RASL10BQ96S79 203 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 FAM173AQ9BQD7 235 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TBCDQ9BTW9 1192 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 IL1RL2Q9HB29 575 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 PNO1Q9NRX1 252 aaKnown RBP8.48□□□□□ -1.05
HDAC3-212ENST00000492407 DNAJC11Q9NVH1 559 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 TNFRSF10DQ9UBN6 386 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 ADGRE2Q9UHX3 823 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CHMP2BQ9UQN3 213 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 RNF6Q9Y252 685 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 PCDHGB3Q9Y5G1 929 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 SPACA6W5XKT8 324 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
HDAC3-212ENST00000492407 CTAGE15A4D2H0 777 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 NPEPPSL1A6NEC2 478 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 GOLGA6L10A6NI86 522 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 A6NJY4 79 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 CCDC188H7C350 402 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 CTIFO43310 598 aaKnown RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 CDC40O60508 579 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 HCN1O60741 890 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 BANF1O75531 89 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 STK16O75716 305 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 OR2J2O76002 312 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 SEC31AO94979 1220 aaKnown RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 SCELO95171 688 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 WISP3O95389 354 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 S100A5P33763 92 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 ST13P50502 369 aaKnown RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 STX4Q12846 297 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 TSNQ15631 228 aaKnown RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 GXYLT1Q4G148 440 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 EMC4Q5J8M3 183 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 CES4AQ5XG92 561 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 CTAGE6Q86UF2 777 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 FAM109AQ8N4B1 249 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 OR2M7Q8NG81 312 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 OR52N2Q8NGI0 321 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 NUBPLQ8TB37 319 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 SUN5Q8TC36 379 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 ANKRD49Q8WVL7 239 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 DTNBP1Q96EV8 351 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 WDR83Q9BRX9 315 aaKnown RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 ALOXE3Q9BYJ1 711 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 COPS7BQ9H9Q2 264 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-212ENST00000492407 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 SACM1LQ9NTJ5 587 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 DEPPQ9NTK1 212 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 MS4A12Q9NXJ0 267 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 KCMF1Q9P0J7 381 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 SLC17A6Q9P2U8 582 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
HDAC3-212ENST00000492407 ZNF490Q9ULM2 529 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms