RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 LIPJQ5W064 366 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 HIST2H2AA3Q6FI13 130 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 OR4C11Q6IEV9 310 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 MRM1Q6IN84 353 aaKnown RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 GRHL2Q6ISB3 625 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 LYPD8Q6UX82 237 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 HSDL2Q6YN16 418 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 C16orf47Q6ZP98 133 aaPredicted RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 RGS9BPQ6ZS82 235 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 CHSY3Q70JA7 882 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 CLNKQ7Z7G1 428 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 MARVELD2Q8N4S9 558 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 TMEM156Q8N614 296 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 PPM1NQ8N819 430 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 SNX31Q8N9S9 440 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 FAM47BQ8NA70 645 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 GOLM1Q8NBJ4 401 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 PSD4Q8NDX1 1056 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 NUBPLQ8TB37 319 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC2A12Q8TD20 617 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 CCT6BQ92526 530 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 TANKQ92844 425 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ISL2Q96A47 359 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 MTFMTQ96DP5 389 aaKnown RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 C14orf79Q96F83 325 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 CMTM7Q96FZ5 175 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 SGCZQ96LD1 299 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 RASL10BQ96S79 203 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 CCDC77Q9BR77 488 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 RAB17Q9H0T7 212 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 TIMMDC1Q9NPL8 285 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 MS4A12Q9NXJ0 267 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 FBXW2Q9UKT8 454 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ACOT9Q9Y305 439 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 CLCA3PQ9Y6N3 262 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ANKRD17O75179 2603 aaKnown RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 NCKAP5O14513 1909 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A087X1B8 175 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A1B0GTH9 108 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 PINLYPA6NC86 204 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SYCE1LA8MT33 242 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 C17orf105B2RV13 164 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 UBXN8O00124 270 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 FOXE1O00358 373 aaPredicted RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 PRRG2O14669 202 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNHIT1O43257 154 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 PROM1O43490 865 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 FGF17O60258 216 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 CCNT2O60583 730 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 LDB3O75112 727 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 KLHL2O95198 593 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 TGFB1P01137 390 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ALDOAP04075 364 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 C2P06681 752 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ABOP16442 354 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 EPB42P16452 691 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 CNR1P21554 472 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 GALNSP34059 522 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 PTGS2P35354 604 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SOX3P41225 446 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 MAGEA12P43365 314 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 STT3AP46977 705 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 NR0B1P51843 470 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 HK2P52789 917 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ALDH18A1P54886 795 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 CUL3Q13618 768 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 AP5B1Q2VPB7 878 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF791Q3KP31 576 aaPredicted RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ARHGAP11AQ6P4F7 1023 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ADGRD1Q6QNK2 874 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 NCCRP1Q6ZVX7 275 aaPredicted RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 TBC1D1Q86TI0 1168 aaPredicted RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 CTAGE3PQ8IX95 158 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SRRM1Q8IYB3 904 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 EID3Q8N140 333 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC15A4Q8N697 577 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF321PQ8N8H1 164 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 L3MBTL4Q8NA19 623 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 OR2M7Q8NG81 312 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 OR52N2Q8NGI0 321 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 OR5L2Q8NGL0 311 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 LILRB4Q8NHJ6 448 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 HUS1BQ8NHY5 278 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 WDR20Q8TBZ3 569 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 NXNL1Q96CM4 212 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 NTNG2Q96CW9 530 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SENP5Q96HI0 755 aaPredicted RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SCYL1Q96KG9 808 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 DDX31Q9H8H2 851 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 LIN28AQ9H9Z2 209 aaKnown RBP7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 OPTCQ9UBM4 332 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 SH3BGRL2Q9UJC5 107 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ATG4BQ9Y4P1 393 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ASB4Q9Y574 426 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 HIVEP1P15822 2718 aa7.76□□□□□ -1.17
SMARCB1-207ENST00000491967 ARHGAP21Q5T5U3 1957 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 CSMD2Q7Z408 3487 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A0A6YYD5 115 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A0G2JMM0 328 aa7.75□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A1W2PPB8 328 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms