RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DIRAS3O95661 229 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 UBL4AP11441 157 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 THBS2P35442 1172 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CEBPGP53567 150 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 MALLQ13021 153 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SLC22A16Q86VW1 577 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CARM1Q86X55 608 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GALNT12Q8IXK2 581 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 HOXB13Q92826 284 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GLYATL1Q969I3 302 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SLC5A7Q9GZV3 580 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GHRLQ9UBU3 117 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 RNF13O43567 381 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 RETP07949 1114 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 JUPP14923 745 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 PRPS1P60891 318 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 MRPS10P82664 201 aaKnown RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CHAF1BQ13112 559 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 KLF1Q13351 362 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 LRP10Q7Z4F1 713 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GDPD1Q8N9F7 314 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 FAM156AQ8NDB6 213 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 OR6N1Q8NGY5 312 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GRHL3Q8TE85 626 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 L3HYPDHQ96EM0 354 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 HBEGFQ99075 208 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SEC61A2Q9H9S3 476 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 HTRA2O43464 458 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SLC9A3P48764 834 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 HMGCS1Q01581 520 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 MC1RQ01726 317 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TMEM69Q5SWH9 247 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 LCN8Q6JVE9 175 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 WDSUB1Q8N9V3 476 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 FAM110BQ8TC76 370 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SLC25A36Q96CQ1 311 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 NECTIN4Q96NY8 510 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 DHDHQ9UQ10 334 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 DLGAP4Q9Y2H0 992 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 NAP1L6A6NFF2 107 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CLCA1A8K7I4 914 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PTTG1O95997 202 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 VAMP1P23763 118 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 GDI1P31150 447 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 MAGEA8P43361 318 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 OC90Q02509 493 aaPredicted RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 AAK1Q2M2I8 961 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 C14orf80Q86SX3 495 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 RNF130Q86XS8 419 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PPM1HQ9ULR3 514 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 GXYLT2A0PJZ3 443 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 HSD17B1P14061 328 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 RPS3AP61247 264 aaKnown RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 DUS1LQ6P1R4 473 aaKnown RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 ARSKQ6UWY0 536 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CCDC71LQ8N9Z2 235 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 FAM174AQ8TBP5 190 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PLEKHO2Q8TD55 490 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 ENAMQ9NRM1 1142 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 OR51F1A6NGY5 319 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 XPNPEP2O43895 674 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 ELNP15502 786 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PGCP20142 388 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 SLC6A8P48029 635 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 TLE3Q04726 772 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 ITPRIPL2Q3MIP1 535 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 TCTE1Q5JU00 501 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 OR52E8Q6IFG1 317 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 SLC22A8Q8TCC7 542 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CAPNS2Q96L46 248 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 HERPUD2Q9BSE4 406 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CPNE5Q9HCH3 593 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PDE7BQ9NP56 450 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 TREM1Q9NP99 234 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 EFCAB7A8K855 629 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CENPBD1B2RD01 187 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 NPIPA2E9PIF3 369 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 NPIPA3F8WFD2 350 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 M0R036 132 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 SAP18O00422 153 aaKnown RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CLDN7O95471 211 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 RNH1P13489 461 aaKnown RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CD40LGP29965 261 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 LASP1Q14847 261 aaKnown RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PRSS48Q7RTY5 328 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 SLC2A13Q96QE2 648 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 OR2M4Q96R27 311 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 C7orf50Q9BRJ6 194 aaKnown RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 ITGB4P16144 1822 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 E7EQ34 232 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PROX2Q3B8N5 592 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 ASPGQ86U10 573 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 OR14K1Q8NGZ2 314 aa8.5□□□□□ -1.05
LSAMP-205ENST00000490035 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms