RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 CRMP1Q14194 572 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 SHQ1Q6PI26 577 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 MEX3DQ86XN8 651 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 NAXDQ8IW45 347 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 TIGD4Q8IY51 512 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 NUP93Q8N1F7 819 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ZNF525Q8N782 197 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ARL10Q8N8L6 244 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 GOT1L1Q8NHS2 421 aaPredicted RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 FLVCR1-AS1Q8TAF5 88 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 DEPDC1BQ8WUY9 529 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 GTSF1Q8WW33 167 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 SLC35C1Q96A29 364 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 CCDC47Q96A33 483 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 RBM18Q96H35 190 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 CCDC43Q96MW1 224 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 SIGLEC12Q96PQ1 595 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 INPP5KQ9BT40 448 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 DEFB126Q9BYW3 111 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 FAM129AQ9BZQ8 928 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ZBP1Q9H171 429 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 MTIF3Q9H2K0 278 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 ST6GALNAC4Q9H4F1 302 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 LMAN1LQ9HAT1 526 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ZNF275Q9NSD4 429 aaPredicted RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 MED17Q9NVC6 651 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ITGA11Q9UKX5 1188 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ISY1Q9ULR0 285 aaKnown RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 FBXO7Q9Y3I1 522 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 PCDHGA1Q9Y5H4 931 aa2.34□□□□□ -2.03
NF1-213ENST00000489712 ZFP37Q9Y6Q3 630 aaPredicted RBP2.34□□□□□ -2.03
NF1-213ENST00000489712 A0A0B4J203 849 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 E7ENQ6 273 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 TGDSO95455 350 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 PRB2P02812 416 aaPredicted RBP2.33□□□□□ -2.04
NF1-213ENST00000489712 OR9G9P0C7N8 305 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 SKILP12757 684 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 LBPP18428 481 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 PSMB4P28070 264 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 SRD5A2P31213 254 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 GP5P40197 560 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 ALDH3B1P43353 468 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 NAGLUP54802 743 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 HMGCS2P54868 508 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 UBXN1Q04323 297 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 SCN1BQ07699 218 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 CETN1Q12798 172 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 CEACAM7Q14002 265 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 CDO1Q16878 200 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 SHEQ5VZ18 495 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 FAM91A1Q658Y4 838 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 ZNF600Q6ZNG1 722 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 GET4Q7L5D6 327 aaPredicted RBP2.33□□□□□ -2.04
NF1-213ENST00000489712 SPATA21Q7Z572 469 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 NLRP14Q86W24 1093 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 ZNF713Q8N859 430 aaPredicted RBP2.33□□□□□ -2.04
NF1-213ENST00000489712 RNF149Q8NC42 400 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 KIF18AQ8NI77 898 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 C8orf46Q8TAG6 207 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 GDAP1Q8TB36 358 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 FAM162AQ96A26 154 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 ZBED6CLQ96FA7 236 aaPredicted RBP2.33□□□□□ -2.04
NF1-213ENST00000489712 THUMPD3Q9BV44 507 aaKnown RBP2.33□□□□□ -2.04
NF1-213ENST00000489712 DBNDD1Q9H9R9 158 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 ADAM22Q9P0K1 906 aa2.33□□□□□ -2.04
NF1-213ENST00000489712 OR5H15A6NDH6 313 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 ZNF724A8MTY0 619 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 FAM86B1E9PN63 330 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 E2F3O00716 465 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 TNFSF11O14788 317 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 STX6O43752 255 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 GRAP2O75791 330 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 LYNP07948 512 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 FAM86B2P0C5J1 330 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 PDGFRAP16234 1089 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 STMN1P16949 149 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 IFNAR1P17181 557 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 ADRA2CP18825 462 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 PTAFRP25105 342 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 ACKR3P25106 362 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 CRKLP46109 303 aaKnown RBP2.32□□□□□ -2.04
NF1-213ENST00000489712 NPY4RP50391 375 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 GPR50Q13585 617 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 ZNF776Q68DI1 518 aaPredicted RBP2.32□□□□□ -2.04
NF1-213ENST00000489712 TMEM182Q6ZP80 229 aaPredicted RBP2.32□□□□□ -2.04
NF1-213ENST00000489712 CCDC170Q8IYT3 715 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 TDHQ8IZJ6 230 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 SAMD12Q8N8I0 201 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 SMYD1Q8NB12 490 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 ZNRF1Q8ND25 227 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 MGARPQ8TDB4 240 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 RIT1Q92963 219 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 ST6GALNAC6Q969X2 333 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 CCDC114Q96M63 670 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 FER1L6-AS2Q96M78 137 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 PRMT1Q99873 361 aaKnown RBP2.32□□□□□ -2.04
NF1-213ENST00000489712 MAPKAP1Q9BPZ7 522 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 FERMT1Q9BQL6 677 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 CCM2Q9BSQ5 444 aa2.32□□□□□ -2.04
NF1-213ENST00000489712 C2orf40Q9H1Z8 148 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms