RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SRFBP1Q8NEF9 429 aaKnown RBP17.06■□□□□ 0.32
HDAC6-231ENST00000488905 CDKL2Q92772 493 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 EXT2Q93063 718 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 SMC6Q96SB8 1091 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 RBBP8Q99708 897 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 MAPKAP1Q9BPZ7 522 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 MS4A8Q9BY19 250 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 KCNJ16Q9NPI9 418 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 PNPLA3Q9NST1 481 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 CD274Q9NZQ7 290 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 PTBP2Q9UKA9 531 aaKnown RBP17.06■□□□□ 0.32
HDAC6-231ENST00000488905 ITPR3Q14573 2671 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 FIGNL2A6NMB9 653 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 RTCAO00442 366 aaKnown RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 BCKDKO14874 412 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 CCNT2O60583 730 aaKnown RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF354AO60765 605 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 SCELO95171 688 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 S100BP04271 92 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 STMN1P16949 149 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 ATP5A1P25705 553 aaKnown RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 SSTR1P30872 391 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 MSH2P43246 934 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 MAGEA5P43359 124 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 IRF8Q02556 426 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 CHIT1Q13231 466 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 ZKSCAN8Q15776 578 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 TBCCQ15814 346 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 HIST2H2ACQ16777 129 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 GXYLT1Q4G148 440 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 HIST2H2AA3Q6FI13 130 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 LRRC70Q7Z2Q7 622 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 TMEM251Q8N6I4 163 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 ACOT4Q8N9L9 421 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 OR5M9Q8NGP3 310 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 PYROXD1Q8WU10 500 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 SGCZQ96LD1 299 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 CPNE1Q99829 537 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 TBCDQ9BTW9 1192 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 IL1RL2Q9HB29 575 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 SACM1LQ9NTJ5 587 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 COPS7AQ9UBW8 275 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 RNF112Q9ULX5 631 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 SNX24Q9Y343 169 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 SPACA6W5XKT8 324 aa17.05■□□□□ 0.32
HDAC6-231ENST00000488905 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-231ENST00000488905 EXPH5Q8NEV8 1989 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 CCL3P10147 92 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 TNNI3P19429 210 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 CNR1P21554 472 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 HIST1H1TP22492 207 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-231ENST00000488905 ACVR2AP27037 513 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 SSR2P43308 183 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 ID2Q02363 134 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 E2F2Q14209 437 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 OPN5Q6U736 354 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 FAM47EQ6ZV65 393 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 DMRTC2Q8IXT2 367 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-231ENST00000488905 OR5L2Q8NGL0 311 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF721Q8TF20 911 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF473Q8WTR7 871 aaKnown RBP17.04■□□□□ 0.32
HDAC6-231ENST00000488905 UBXN10Q96LJ8 280 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 PRM3Q9NNZ6 103 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 TNFRSF10DQ9UBN6 386 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 SAR1BQ9Y6B6 198 aa17.04■□□□□ 0.32
HDAC6-231ENST00000488905 HRNRQ86YZ3 2850 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-231ENST00000488905 A0A1B0GVC2 190 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 TCRBV9S1A1TA0A576 114 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 ETHE1O95571 254 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 P04436 131 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 COX7A2P14406 83 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 GP5P40197 560 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 CASP2P42575 452 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 DNASE1L1P49184 302 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 RAB10P61026 200 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 FOXO1Q12778 655 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 TMEM35AQ53FP2 167 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF585AQ6P3V2 769 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 B3GNT6Q6ZMB0 384 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 TRILQ7L0X0 811 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 LAS2Q8IYD9 372 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 BBOF1Q8ND07 529 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 UBE2E3Q969T4 207 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 ANKRD9Q96BM1 317 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-231ENST00000488905 KRT12Q99456 494 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 NAPGQ99747 312 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-231ENST00000488905 CD244Q9BZW8 370 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 PHACTR1Q9C0D0 580 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 SAYSD1Q9NPB0 183 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 NUDT4Q9NZJ9 180 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 ATG4BQ9Y4P1 393 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 FAM215AQ9Y5M1 114 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 VPS13CQ709C8 3753 aa17.03■□□□□ 0.32
HDAC6-231ENST00000488905 FAM159BA6NKW6 160 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 AQP7O14520 342 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 FGF17O60258 216 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 SH3BGRLO75368 114 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 HOXD4P09016 255 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-231ENST00000488905 CELA3AP09093 270 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 PCNAP12004 261 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms