RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CKMT2P17540 419 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 MPIP34949 423 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 DSTNP60981 165 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 NRF1Q16656 503 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 NIPAL1Q6NVV3 410 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 CCDC80Q76M96 950 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 RNF130Q86XS8 419 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 CBR4Q8N4T8 237 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 AMER3Q8N944 861 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 KCT2Q8NC54 265 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 LZICQ8WZA0 190 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 SLC38A3Q99624 504 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 TRIM4Q9C037 500 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 RAPGEFL1Q9UHV5 662 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 ATG4BQ9Y4P1 393 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 CSNK1G3Q9Y6M4 447 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 ZNF780BQ9Y6R6 833 aa19.29■□□□□ 0.68
PHF1-209ENST00000487667 MDC1Q14676 2089 aaKnown RBP19.29■□□□□ 0.68
PHF1-209ENST00000487667 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 PPM1DO15297 605 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 NOBOXO60393 691 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 AIFM1O95831 613 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 NR2F6P10588 404 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 ZNF23P17027 643 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 CSNK2A2P19784 350 aaPredicted RBP19.28■□□□□ 0.68
PHF1-209ENST00000487667 GPC1P35052 558 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 CAPZBP47756 277 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 EPHA4P54764 986 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 SKP1P63208 163 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 SCARB2Q14108 478 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 ZDHHC13Q8IUH4 622 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 TMEFF1Q8IYR6 380 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 FAM110BQ8TC76 370 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 AMDHD1Q96NU7 426 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 MACROD1Q9BQ69 325 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 LYRM4Q9HD34 91 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 IL1RAPQ9NPH3 570 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 SLAMF7Q9NQ25 335 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 GPATCH2Q9NW75 528 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 FBXW2Q9UKT8 454 aa19.28■□□□□ 0.68
PHF1-209ENST00000487667 NUP214P35658 2090 aaPredicted RBP19.28■□□□□ 0.68
PHF1-209ENST00000487667 TMEM247A6NEH6 219 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 C4orf51C9J302 202 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 H0YGG7 62 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 SUV39H1O43463 412 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 PDGFBP01127 241 aaPredicted RBP19.27■□□□□ 0.68
PHF1-209ENST00000487667 FESP07332 822 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 ARAFP10398 606 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 ETFAP13804 333 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 ALOX12P18054 663 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 BCKDHBP21953 392 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 CDH3P22223 829 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 CCT3P49368 545 aaKnown RBP19.27■□□□□ 0.68
PHF1-209ENST00000487667 ARF3P61204 181 aaPredicted RBP19.27■□□□□ 0.68
PHF1-209ENST00000487667 CDK6Q00534 326 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 SIGLEC14Q08ET2 396 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 SPIDRQ14159 915 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 CEBPEQ15744 281 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 PATL1Q86TB9 770 aaKnown RBP19.27■□□□□ 0.68
PHF1-209ENST00000487667 RDH12Q96NR8 316 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 SLC29A1Q99808 456 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 CCDC3Q9BQI4 270 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 EPB41L1Q9H4G0 881 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 MAP4K5Q9Y4K4 846 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 SLC22A7Q9Y694 548 aa19.27■□□□□ 0.68
PHF1-209ENST00000487667 SOCS2O14508 198 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 SH3BP5O60239 455 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 HPRP00739 348 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 PROS1P07225 676 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 NCBP2P52298 156 aaKnown RBP eCLIP19.27■□□□□ 0.679e-6■□□□□ 8.4
PHF1-209ENST00000487667 TNFRSF17Q02223 184 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 HSPB3Q12988 150 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 PDK3Q15120 406 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 PIWIL3Q7Z3Z3 882 aaKnown RBP19.27■□□□□ 0.67
PHF1-209ENST00000487667 EPHX4Q8IUS5 362 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 FAM86B1Q8N7N1 296 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 EDAQ92838 391 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 NPLQ9BXD5 320 aaPredicted RBP19.27■□□□□ 0.67
PHF1-209ENST00000487667 YIPF3Q9GZM5 350 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 RAB33BQ9H082 229 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 GLIPR2Q9H4G4 154 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 CES1P1Q9UKY3 287 aa19.27■□□□□ 0.67
PHF1-209ENST00000487667 ACOX3O15254 700 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 AHCYL1O43865 530 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 SRPX2O60687 465 aaPredicted RBP19.26■□□□□ 0.67
PHF1-209ENST00000487667 DPM1O60762 260 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 PIAS2O75928 621 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 STATHP02808 62 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 GNSP15586 552 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 CHN2P52757 468 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 MAZP56270 477 aaKnown RBP19.26■□□□□ 0.67
PHF1-209ENST00000487667 C14orf28Q4W4Y0 310 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 COX20Q5RI15 118 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 C6orf120Q7Z4R8 191 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 ZDHHC21Q8IVQ6 265 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 CLEC4FQ8N1N0 589 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 C19orf47Q8N9M1 422 aaKnown RBP19.26■□□□□ 0.67
PHF1-209ENST00000487667 OR5AK3PQ8NH89 298 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 TMBIM1Q969X1 311 aa19.26■□□□□ 0.67
PHF1-209ENST00000487667 TCTN2Q96GX1 697 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms