RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 WDR41Q9HAD4 459 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 PNO1Q9NRX1 252 aaKnown RBP18.36■□□□□ 0.53
SEC22A-208ENST00000487572 RIC8BQ9NVN3 520 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 RALYQ9UKM9 306 aaKnown RBP18.36■□□□□ 0.53
SEC22A-208ENST00000487572 RAP2CQ9Y3L5 183 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 LOC400499M0QZD8 3231 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 TCRBV16S1A1N1A0A5B0 115 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 BLACEA4D250 179 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 SEC22BO75396 215 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 CELA2AP08217 269 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 PPP2R1BP30154 601 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 TIA1P31483 386 aaKnown RBP eCLIP18.35■□□□□ 0.53
SEC22A-208ENST00000487572 PPP2R2AP63151 447 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 RAE1P78406 368 aaKnown RBP18.35■□□□□ 0.53
SEC22A-208ENST00000487572 Q0VFX4 171 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 AIMP2Q13155 320 aaKnown RBP18.35■□□□□ 0.53
SEC22A-208ENST00000487572 KCNAB2Q13303 367 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 NR6A1Q15406 480 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 PAPD4Q6PIY7 484 aaKnown RBP18.35■□□□□ 0.53
SEC22A-208ENST00000487572 PCSK4Q6UW60 755 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 RIPOR1Q6ZS17 1223 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 GALNT16Q8N428 558 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 EXD3Q8N9H8 876 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 CDC26Q8NHZ8 85 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 UCN3Q969E3 161 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 TUBB6Q9BUF5 446 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 ILKAPQ9H0C8 392 aaPredicted RBP18.35■□□□□ 0.53
SEC22A-208ENST00000487572 MANSC1Q9H8J5 431 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 MCM8Q9UJA3 840 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 CCL27Q9Y4X3 112 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 POLR3HQ9Y535 204 aaPredicted RBP18.35■□□□□ 0.53
SEC22A-208ENST00000487572 SCN2AQ99250 2005 aa18.35■□□□□ 0.53
SEC22A-208ENST00000487572 A0A1W2PQ72 361 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 WASHC1A8K0Z3 465 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 MKRN2OSH3BPM6 223 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 FGF17O60258 216 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 GUCY1B2O75343 617 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 IFNA16P05015 189 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 PDCD2Q16342 344 aaPredicted RBP18.34■□□□□ 0.53
SEC22A-208ENST00000487572 GALNTL6Q49A17 601 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 NDUFAF5Q5TEU4 345 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 ATG16L1Q676U5 607 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 MMP21Q8N119 569 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 DYDC1Q8WWB3 177 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 TANKQ92844 425 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 ANKRD9Q96BM1 317 aaPredicted RBP18.34■□□□□ 0.53
SEC22A-208ENST00000487572 THOC3Q96J01 351 aaKnown RBP18.34■□□□□ 0.53
SEC22A-208ENST00000487572 LPAR4Q99677 370 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 WDR77Q9BQA1 342 aaPredicted RBP18.34■□□□□ 0.53
SEC22A-208ENST00000487572 SLC25A23Q9BV35 468 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 ALOXE3Q9BYJ1 711 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 LRTM1Q9HBL6 345 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.34■□□□□ 0.53
SEC22A-208ENST00000487572 CLDN16Q9Y5I7 305 aa18.34■□□□□ 0.53
SEC22A-208ENST00000487572 PGRMC2O15173 223 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 MYO1DO94832 1006 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 SNUPNO95149 360 aaKnown RBP18.33■□□□□ 0.52
SEC22A-208ENST00000487572 ANXA4P09525 319 aaPredicted RBP18.33■□□□□ 0.52
SEC22A-208ENST00000487572 RPL14P50914 215 aaKnown RBP18.33■□□□□ 0.52
SEC22A-208ENST00000487572 TAS2R50P59544 299 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 FOLH1Q04609 750 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 BTBD16Q32M84 506 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 IRAK1BP1Q5VVH5 260 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 OR52E8Q6IFG1 317 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 RNF165Q6ZSG1 346 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 Q6ZSR9 355 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 HOMEZQ8IX15 550 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 KBTBD2Q8IY47 623 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 FDCSPQ8NFU4 85 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 RAB3IL1Q8TBN0 382 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 TM4SF18Q96CE8 201 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 ABHD17AQ96GS6 310 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 PPP1R36Q96LQ0 422 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 IMMP1LQ96LU5 166 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 PNPOQ9NVS9 261 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 C1orf109Q9NX04 203 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 GPR83Q9NYM4 423 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 GIMAP2Q9UG22 337 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 G3BP2Q9UN86 482 aaKnown RBP18.33■□□□□ 0.52
SEC22A-208ENST00000487572 NBEAQ8NFP9 2946 aa18.33■□□□□ 0.52
SEC22A-208ENST00000487572 ATP6AP2A0A1C7CYW4 349 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 ATXN7O15265 892 aaPredicted RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 ATP6AP2O75787 350 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 JUNP05412 331 aaKnown RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 IL3P08700 152 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 PRPH2P23942 346 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 ALDH9A1P49189 494 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 TRA2BP62995 288 aaKnown RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 RPL38P63173 70 aaKnown RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 GALNT18Q6P9A2 607 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 C9orf43Q8TAL5 461 aaPredicted RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 C16orf78Q8WTQ4 265 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 ZNF75CPQ92670 426 aaPredicted RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 C19orf60Q96EN9 201 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 C11orf24Q96F05 449 aaPredicted RBP18.32■□□□□ 0.52
SEC22A-208ENST00000487572 C3orf30Q96M34 536 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 NUDT9Q9BW91 350 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 FAIM2Q9BWQ8 316 aa18.32■□□□□ 0.52
SEC22A-208ENST00000487572 LHPPQ9H008 270 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms