RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DCHS2Q6V1P9 2916 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 TCRBV9S1A1TA0A576 114 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 TGFB1P01137 390 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 C1QAP02745 245 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 S100BP04271 92 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-205ENST00000485397 GP5P40197 560 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 DNASE1L1P49184 302 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 SERTAD2Q14140 314 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 TESK1Q15569 626 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 ZKSCAN8Q15776 578 aaPredicted RBP17.81■□□□□ 0.44
COL27A1-205ENST00000485397 TBCCQ15814 346 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 RGS9BPQ6ZS82 235 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 SLC22A16Q86VW1 577 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 OR4N5Q8IXE1 308 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 TMEM251Q8N6I4 163 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 BBOF1Q8ND07 529 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 SRFBP1Q8NEF9 429 aaKnown RBP17.81■□□□□ 0.44
COL27A1-205ENST00000485397 OR5M3Q8NGP4 307 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 OR8K3Q8NH51 312 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 UBXN10Q96LJ8 280 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 SMC6Q96SB8 1091 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 FAM173AQ9BQD7 235 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 ALG9Q9H6U8 611 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 TNFRSF10DQ9UBN6 386 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 DNAJC13O75165 2243 aa17.81■□□□□ 0.44
COL27A1-205ENST00000485397 FAM159BA6NKW6 160 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 SAP18O00422 153 aaKnown RBP17.8■□□□□ 0.44
COL27A1-205ENST00000485397 FANCGO15287 622 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 CCL3P10147 92 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 PCNAP12004 261 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 HIST1H1TP22492 207 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-205ENST00000485397 CPN2P22792 545 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 CASP2P42575 452 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 MAGEA5P43359 124 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 RAB10P61026 200 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 DLG1Q12959 904 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 E2F2Q14209 437 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 ZNF585AQ6P3V2 769 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 GK5Q6ZS86 529 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 LRRC70Q7Z2Q7 622 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 OR5L2Q8NGL0 311 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 ZNF721Q8TF20 911 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 SORBS1Q9BX66 1292 aaKnown RBP17.8■□□□□ 0.44
COL27A1-205ENST00000485397 IL1RL2Q9HB29 575 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 KCNJ16Q9NPI9 418 aa17.8■□□□□ 0.44
COL27A1-205ENST00000485397 SEMA4BQ9NPR2 832 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-205ENST00000485397 INTS1Q8N201 2190 aaKnown RBP17.8■□□□□ 0.44
COL27A1-205ENST00000485397 EML6Q6ZMW3 1958 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 FGF17O60258 216 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 FAM155BO75949 473 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 IGHG3P01860 377 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 CELA3AP09093 270 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 MSX1P28360 303 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 RIPPLY3P57055 190 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 GPX6P59796 221 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 FOXO1Q12778 655 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 ASPHQ12797 758 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 AP5B1Q2VPB7 878 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 TMEM35AQ53FP2 167 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 NDUFAF5Q5TEU4 345 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 MED27Q6P2C8 311 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 OPN5Q6U736 354 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 C3orf62Q6ZUJ4 267 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 FAM47EQ6ZV65 393 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 ACAD11Q709F0 780 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 TRILQ7L0X0 811 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 CMC1Q7Z7K0 106 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 ISCA2Q86U28 154 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 CTAGE3PQ8IX95 158 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 LAS2Q8IYD9 372 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 FAM109AQ8N4B1 249 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 RNF175Q8N4F7 328 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 GOLM1Q8NBJ4 401 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 DOK4Q8TEW6 326 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 SGCZQ96LD1 299 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 ERP44Q9BS26 406 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 PHACTR1Q9C0D0 580 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 OR51B5Q9H339 312 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 GRPEL1Q9HAV7 217 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 SACM1LQ9NTJ5 587 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 TUBA8Q9NY65 449 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-205ENST00000485397 WHRNQ9P202 907 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 SPACA6W5XKT8 324 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 HCFC1P51610 2035 aa17.79■□□□□ 0.44
COL27A1-205ENST00000485397 ATP6AP2A0A1C7CYW4 349 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 EIF3HO15372 352 aaKnown RBP eCLIP17.78■□□□□ 0.442e-29■■□□□ 12.3
COL27A1-205ENST00000485397 ATP6AP2O75787 350 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 SCELO95171 688 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 ACVR2AP27037 513 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 SSR2P43308 183 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 CALCOCO2Q13137 446 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 PIGGQ5H8A4 983 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 DGAT2L6Q6ZPD8 337 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 CHSY3Q70JA7 882 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 CYS1Q717R9 158 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 DMRTC2Q8IXT2 367 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-205ENST00000485397 OR7G3Q8NG95 312 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 STAG3L4Q8TBR4 150 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 UBE2E3Q969T4 207 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 PPWD1Q96BP3 646 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms