RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SCN2BO60939 215 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 OR7A10O76100 309 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 AP2A2O94973 939 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 CKMP06732 381 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 NAGAP17050 411 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 AMD1P17707 334 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 RPS3P23396 243 aaKnown RBP eCLIP13.65□□□□□ -0.224e-6■□□□□ 11.1
COL9A2-207ENST00000482722 EVI2BP34910 448 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 TAGLNQ01995 201 aaKnown RBP13.65□□□□□ -0.22
COL9A2-207ENST00000482722 PCDH1Q08174 1060 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 GANABQ14697 944 aaKnown RBP13.65□□□□□ -0.22
COL9A2-207ENST00000482722 ATP13A5Q4VNC0 1218 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 LCN1P1Q5VSP4 162 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 ADNP2Q6IQ32 1131 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 RETSATQ6NUM9 610 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 SLC39A11Q8N1S5 342 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 HJURPQ8NCD3 748 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-207ENST00000482722 ATP6V1C2Q8NEY4 427 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 SLC25A46Q96AG3 418 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 IL4I1Q96RQ9 567 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 C2orf49Q9BVC5 232 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-207ENST00000482722 C1QTNF7Q9BXJ2 289 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 CLN6Q9NWW5 311 aa13.65□□□□□ -0.22
COL9A2-207ENST00000482722 PLEKHB1Q9UF11 243 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-207ENST00000482722 ATG2BQ96BY7 2078 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HYKKA2RU49 373 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 SNTNA6NMZ2 147 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 WASHC1A8K0Z3 465 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 PDPK1O15530 556 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 GCM2O75603 506 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 GSTM1P09488 218 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 SRCP12931 536 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HLA-EP13747 358 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 CNR2P34972 360 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 RHAGQ02094 409 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 MTAPQ13126 283 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 SPHARQ15513 63 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 GDPGP1Q6ZNW5 385 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 VRK3Q8IV63 474 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 CHTF18Q8WVB6 975 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 MSLNLQ96KJ4 702 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 C17orf62Q9BQA9 187 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HTATIP2Q9BUP3 242 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 GALNT9Q9HCQ5 603 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 NLKQ9UBE8 527 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 OR51B4Q9Y5P0 310 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 SH3D21A4FU49 640 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 FAM227AF5H4B4 570 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 PCDH17O14917 1159 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ENTPD6O75354 484 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 TRIM3O75382 744 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 URODP06132 367 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 CLTBP09497 229 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HIST1H2AGP0C0S8 130 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 CTRB1P17538 263 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HIST1H2ADP20671 130 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ITGB7P26010 798 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 APEX1P27695 318 aaKnown RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 CTSOP43234 321 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ALDH6A1Q02252 535 aaKnown RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 NFE2L1Q14494 772 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 LIPKQ5VXJ0 399 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 MARVELD3Q96A59 401 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 UPRTQ96BW1 309 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ZBED6CLQ96FA7 236 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HIST1H2AHQ96KK5 128 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 HIST1H2AJQ99878 128 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 H2AFJQ9BTM1 129 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 ACAT2Q9BWD1 397 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 SLC29A3Q9BZD2 475 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
COL9A2-207ENST00000482722 MYL12BO14950 172 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 TGM5O43548 720 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 EFEMP2O95967 443 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 HBQ1P09105 142 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 MSL3P1P0C860 447 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 ZNF250P15622 560 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 MYL12AP19105 171 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 FEN1P39748 380 aaKnown RBP13.63□□□□□ -0.23
COL9A2-207ENST00000482722 CRATP43155 626 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 SLC9A3P48764 834 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 GAB1Q13480 694 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 DGKKQ5KSL6 1271 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 ZBTB37Q5TC79 503 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 CNKSR3Q6P9H4 555 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL9A2-207ENST00000482722 C9orf62Q8N4C0 152 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 DCAF4L2Q8NA75 395 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 CMTM7Q96FZ5 175 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 FAM129BQ96TA1 746 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 ZSCAN5AQ9BUG6 496 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 MALT1Q9UDY8 824 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 SSR3Q9UNL2 185 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 RABL2BQ9UNT1 228 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 CCL26Q9Y258 94 aa13.63□□□□□ -0.23
COL9A2-207ENST00000482722 INSL5Q9Y5Q6 135 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms