RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 CCDC73Q6ZRK6 1079 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 PAQR9Q6ZVX9 377 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 KCTD8Q6ZWB6 473 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 G2E3Q7L622 706 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 TAS2R42Q7RTR8 314 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 ADAD2Q8NCV1 583 aaKnown RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 PINX1Q96BK5 328 aaKnown RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 ZNF274Q96GC6 653 aaPredicted RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 NEDD4LQ96PU5 975 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 NDUFAF3Q9BU61 184 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 WRAP53Q9BUR4 548 aaKnown RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 CAPS2Q9BXY5 557 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 TECRQ9NZ01 308 aaKnown RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 PRDM4Q9UKN5 801 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 EVPLQ92817 2033 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 KIF16BQ96L93 1317 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 SPATA31D1Q6ZQQ2 1576 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 IGLV5-45A0A087WSX0 123 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 IGLV9-49A0A0B4J1Y8 123 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 SH3PXD2BA1X283 911 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 CLEC18AA5D8T8 446 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 RNF222A6NCQ9 220 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 SNURFLB1AK76 121 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 ATP6V0E1O15342 81 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 DCXO43602 365 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 EXTL3O43909 919 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 ECE2O60344 883 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 GPX3P22352 226 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 CTNNA2P26232 953 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 CA8P35219 290 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 CHI3L1P36222 383 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 MTIF2P46199 727 aaKnown RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 NPY2RP49146 381 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 OR1D5P58170 312 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 TUBA1BP68363 451 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 MFGE8Q08431 387 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 CNTN1Q12860 1018 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 NFATC2Q13469 925 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 SF3B4Q15427 424 aaKnown RBP eCLIP4.75□□□□□ -1.657e-10■■■□□ 17.4
COPA-203ENST00000481040 CLPPQ16740 277 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 IMMTQ16891 758 aaKnown RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 CFAP221Q4G0U5 840 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 XKR6Q5GH73 641 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 ZNF311Q5JNZ3 666 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 RABGAP1LQ5R372 815 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 LCN1P1Q5VSP4 162 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 TPGS2Q68CL5 300 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 CAPN13Q6MZZ7 669 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 SLC39A4Q6P5W5 647 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 RFPL4BQ6ZWI9 263 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 ANO5Q75V66 913 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 LHFPL4Q7Z7J7 247 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 GPC2Q8N158 579 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 CLEC18CQ8NCF0 446 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 TMEM37Q8WXS4 190 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 OSTF1Q92882 214 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 SENP8Q96LD8 212 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 TCEANC2Q96MN5 208 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 VPS35Q96QK1 796 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 ERGIC2Q96RQ1 377 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 LRRC1Q9BTT6 524 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 WWP1Q9H0M0 922 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 FAM124BQ9H5Z6 455 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 KLHL8Q9P2G9 620 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 POLKQ9UBT6 870 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 DBF4Q9UBU7 674 aaPredicted RBP4.75□□□□□ -1.65
COPA-203ENST00000481040 CLEC4AQ9UMR7 237 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 B9D1Q9UPM9 204 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 TMED5Q9Y3A6 229 aa4.75□□□□□ -1.65
COPA-203ENST00000481040 ZNF804BA4D1E1 1349 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 WDR33Q9C0J8 1336 aaKnown RBP4.74□□□□□ -1.65
COPA-203ENST00000481040 PTPRUQ92729 1446 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 SMCHD1A6NHR9 2005 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 E9PMD0 336 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 SGK494L7N484 410 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 SOCS2O14508 198 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 SDHDO14521 159 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 P2RX6O15547 441 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 SDC3O75056 442 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 GLRA3O75311 464 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 SAP30O75446 220 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 DFFBO76075 338 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 IL1BP01584 269 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 CYP11B1P15538 503 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 TRIM23P36406 574 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 ATP5OP48047 213 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 ACADVLP49748 655 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 RGS4P49798 205 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 NAPAP54920 295 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 AIF1P55008 147 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 INHBEP58166 350 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 HERV-K104P61576 105 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 DRP2Q13474 957 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 FGD3Q5JSP0 725 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 CCBE1Q6UXH8 406 aaPredicted RBP4.74□□□□□ -1.65
COPA-203ENST00000481040 C17orf64Q86WR6 236 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 CBWD2Q8IUF1 395 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 ELMOD1Q8N336 334 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 PARP8Q8N3A8 854 aa4.74□□□□□ -1.65
COPA-203ENST00000481040 FAM89BQ8N5H3 189 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms