RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 RAB8BQ92930 207 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 TM4SF18Q96CE8 201 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 MENTQ9BUN1 341 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 RSPO3Q9BXY4 272 aaPredicted RBP16.29■□□□□ 0.2
PKD1-213ENST00000480227 MS4A8Q9BY19 250 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 MBNL1Q9NR56 388 aaKnown RBP16.29■□□□□ 0.2
PKD1-213ENST00000480227 FBXO8Q9NRD0 319 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 PLCXD1Q9NUJ7 323 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 MS4A12Q9NXJ0 267 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 HCN4Q9Y3Q4 1203 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 ENPP4Q9Y6X5 453 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 DOCK8Q8NF50 2099 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 ATG2AQ2TAZ0 1938 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 MID1O15344 667 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 GASTP01350 101 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 IFNW1P05000 195 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 CDH3P22223 829 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 POU1F1P28069 291 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 OPRD1P41143 372 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 PXNP49023 591 aaPredicted RBP16.29■□□□□ 0.2
PKD1-213ENST00000480227 CLCNKAP51800 687 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 TAS2R38P59533 333 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 ST3GAL4Q11206 333 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 PUM1Q14671 1186 aaKnown RBP eCLIP16.29■□□□□ 0.2
PKD1-213ENST00000480227 PTGES3Q15185 160 aaKnown RBP16.29■□□□□ 0.2
PKD1-213ENST00000480227 TBCEQ15813 527 aaPredicted RBP16.29■□□□□ 0.2
PKD1-213ENST00000480227 METRNLQ641Q3 311 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 ADAMTSL4Q6UY14 1074 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 TAGAPQ8N103 731 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 AMER3Q8N944 861 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 ZNF675Q8TD23 568 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 SLC38A5Q8WUX1 472 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 HDAC8Q9BY41 377 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 LHX9Q9NQ69 397 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 TAS2R16Q9NYV7 291 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 AHSPQ9NZD4 102 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 OSGIN1Q9UJX0 560 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 WDR37Q9Y2I8 494 aa16.29■□□□□ 0.2
PKD1-213ENST00000480227 LOC100506127A0A0U1RQW1 187 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 C5orf58C9J3I9 102 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 PPM1DO15297 605 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 B4GALT2O60909 372 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 STATHP02808 62 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 HSMCR30P0CW71 290 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 ERGP11308 486 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 GABRB1P18505 474 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 CRISP3P54108 245 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 KCNC4Q03721 635 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 OXA1LQ15070 435 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 TANGO2Q6ICL3 276 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 REEP3Q6NUK4 255 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 DEPDC4Q8N2C3 294 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 MCFD2Q8NI22 146 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 KLK6Q92876 244 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 EXOSC8Q96B26 276 aaKnown RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 AIF1LQ9BQI0 150 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 SERGEFQ9UGK8 458 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 ICKQ9UPZ9 632 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 TSC22D4Q9Y3Q8 395 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 MDC1Q14676 2089 aaKnown RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 A0A1W2PPV9 198 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 PTHP01270 115 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 LIMS1P48059 325 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 LIM2P55344 173 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 RPA4Q13156 261 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 DNASE1L3Q13609 305 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 SOWAHCQ53LP3 525 aaPredicted RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 MLIPQ5VWP3 458 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 FAM109BQ6ICB4 259 aaPredicted RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 DSG4Q86SJ6 1040 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 FAM20CQ8IXL6 584 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 LINC01555Q8NAE3 123 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 MROQ9BYG7 248 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 RHBGQ9H310 441 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 RNF167Q9H6Y7 350 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 FKBP14Q9NWM8 211 aa16.28■□□□□ 0.2
PKD1-213ENST00000480227 TEX10Q9NXF1 929 aaPredicted RBP16.28■□□□□ 0.2
PKD1-213ENST00000480227 FFAR1O14842 300 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 TMPRSS11DO60235 418 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 RHCEP18577 417 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 GRK5P34947 590 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 MAPK11Q15759 364 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 SPDYE7PQ495Y7 208 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 FBXO46Q6PJ61 603 aaPredicted RBP16.27■□□□□ 0.2
PKD1-213ENST00000480227 KLHL17Q6TDP4 642 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 DENND6BQ8NEG7 585 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 ROGDIQ9GZN7 287 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 DSN1Q9H410 356 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 OSGEPL1Q9H4B0 414 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 NMNAT1Q9HAN9 279 aaPredicted RBP16.27■□□□□ 0.2
PKD1-213ENST00000480227 SPATA7Q9P0W8 599 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 RWDD3Q9Y3V2 267 aa16.27■□□□□ 0.2
PKD1-213ENST00000480227 WASHC1A8K0Z3 465 aa16.27■□□□□ 0.19
PKD1-213ENST00000480227 PDPK1O15530 556 aa16.27■□□□□ 0.19
PKD1-213ENST00000480227 OR1F1O43749 312 aa16.27■□□□□ 0.19
PKD1-213ENST00000480227 LCMT2O60294 686 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms