RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 RFXANKO14593 260 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 NUDT21O43809 227 aaKnown RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 TPPPO94811 219 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 ZNF682O95780 498 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 AGR2O95994 175 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 C8BP07358 591 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 GPX3P22352 226 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 GSTM2P28161 218 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SLC5A2P31639 672 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 GSK3BP49841 420 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 HSPB3Q12988 150 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 TAF13Q15543 124 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 NRF1Q16656 503 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 YOD1Q5VVQ6 348 aaPredicted RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 LCN8Q6JVE9 175 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 ENPP6Q6UWR7 440 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 KIAA0907Q7Z7F0 614 aaPredicted RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 SVOPLQ8N434 492 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 PDPRQ8NCN5 879 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 OR4F6Q8NGB9 312 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 PIH1D2Q8WWB5 315 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 TMCO6Q96DC7 493 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 ZNF419Q96HQ0 510 aaPredicted RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 RDH12Q96NR8 316 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SEMA6AQ9H2E6 1030 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 TMEM27Q9HBJ8 222 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 TMEM181Q9P2C4 612 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 VPS29Q9UBQ0 182 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 EGFL7Q9UHF1 273 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SARDHQ9UL12 918 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 NEU3Q9UQ49 428 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 MICAL3Q7RTP6 2002 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 FAM149AA5PLN7 773 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 TMEM202A6NGA9 273 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 ENO4A6NNW6 628 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 FAM220BPB1ANY3 271 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 HNRNPCL2B2RXH8 293 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 ARNTLO00327 626 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 BTN3A3O00478 584 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 HRO43593 1189 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 GMFGO60234 142 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 OR1I1O60431 355 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 MAN1A2O60476 641 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 TIPRLO75663 272 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 C8orf89P0DMQ9 161 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 RAP2AP10114 183 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 HSD3B1P14060 373 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 PRPS1L1P21108 318 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 RYKP34925 604 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 MSX2P35548 267 aaPredicted RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 KIR2DL1P43626 348 aaPredicted RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 PGFP49763 221 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 NCBP2P52298 156 aaKnown RBP eCLIP5.69□□□□□ -1.5
CPS1-207ENST00000479988 CTSCP53634 463 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 CDKL1Q00532 357 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 DPTQ07507 201 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 LRRC23Q53EV4 343 aaPredicted RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 MSANTD1Q6ZTZ1 278 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 NEK10Q6ZWH5 1172 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SYVN1Q86TM6 617 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 HIPK1Q86Z02 1210 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SPPL2CQ8IUH8 684 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SLC15A3Q8IY34 581 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SFRP1Q8N474 314 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 DCBLD1Q8N8Z6 715 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 RCBTB1Q8NDN9 531 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 OR4A15Q8NGL6 344 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 DIO2Q92813 273 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 GATA6Q92908 595 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 ZCCHC3Q9NUD5 404 aaKnown RBP5.69□□□□□ -1.5
CPS1-207ENST00000479988 MAT2BQ9NZL9 334 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 PCDHGA7Q9Y5G6 932 aa5.69□□□□□ -1.5
CPS1-207ENST00000479988 SHROOM3Q8TF72 1996 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 SAP18O00422 153 aaKnown RBP5.68□□□□□ -1.5
CPS1-207ENST00000479988 HTRA2O43464 458 aaPredicted RBP5.68□□□□□ -1.5
CPS1-207ENST00000479988 MOSPD3O75425 235 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 SNX4O95219 450 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 FESP07332 822 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 ATP6V1B2P21281 511 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 CD82P27701 267 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 AGTR2P50052 363 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 SELENOVP59797 346 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 TUBA4AP68366 448 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 CLPPQ16740 277 aaPredicted RBP5.68□□□□□ -1.5
CPS1-207ENST00000479988 FAM69BQ5VUD6 431 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 NAIF1Q69YI7 327 aaPredicted RBP5.68□□□□□ -1.5
CPS1-207ENST00000479988 OPN5Q6U736 354 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 RNF44Q7L0R7 432 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 NUP54Q7Z3B4 507 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 NRROSQ86YC3 692 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 DEPDC4Q8N2C3 294 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 CANT1Q8WVQ1 401 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 LRTOMTQ8WZ04 291 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 ESAMQ96AP7 390 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 CLDN23Q96B33 292 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 CCDC74BQ96LY2 380 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 PKP2Q99959 881 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 NEK6Q9HC98 313 aa5.68□□□□□ -1.5
CPS1-207ENST00000479988 SMPD3Q9NY59 655 aaPredicted RBP5.68□□□□□ -1.5
CPS1-207ENST00000479988 BDP1A6H8Y1 2624 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms