RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ROGDIQ9GZN7 287 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 SENP1Q9P0U3 644 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF223Q9UK11 482 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-218ENST00000479554 PPIEQ9UNP9 301 aaKnown RBP13.36□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF835Q9Y2P0 537 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 ASB1Q9Y576 335 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 CLDN16Q9Y5I7 305 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 ACTL7BQ9Y614 415 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 IKBKGQ9Y6K9 419 aa13.36□□□□□ -0.27
ATG4B-218ENST00000479554 CACNA1DQ01668 2161 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 K7EPI3 171 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 UBXN8O00124 270 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 CYR61O00622 381 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
ATG4B-218ENST00000479554 PCNAP12004 261 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 ABOP16442 354 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 CASP2P42575 452 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 MEOX1P50221 254 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 SSR4P51571 173 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 SMSP52788 366 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 STX4Q12846 297 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 DLG1Q12959 904 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 ELAVL1Q15717 326 aaKnown RBP13.35□□□□□ -0.27
ATG4B-218ENST00000479554 BNC2Q6ZN30 1099 aaPredicted RBP13.35□□□□□ -0.27
ATG4B-218ENST00000479554 ISCA2Q86U28 154 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 EXOC3L1Q86VI1 746 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 TMEM132CQ8N3T6 1108 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 UBE2E3Q969T4 207 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 ATOH8Q96SQ7 321 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 MS4A8Q9BY19 250 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 LYRM4Q9HD34 91 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 PRDM7Q9NQW5 492 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 OPTCQ9UBM4 332 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 TBK1Q9UHD2 729 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 CLCA3PQ9Y6N3 262 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 SPACA6W5XKT8 324 aa13.35□□□□□ -0.27
ATG4B-218ENST00000479554 IQANK1A0A1B0GTG1 560 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 SYCE1LA8MT33 242 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 KLRC4-KLRK1H3BQV0 150 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-218ENST00000479554 CTNSO60931 367 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ZFAND5O76080 213 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 INHBAP08476 426 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 GRNP28799 593 aaKnown RBP13.34□□□□□ -0.27
ATG4B-218ENST00000479554 SERPINB1P30740 379 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 GPR143P51810 404 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ADORA2A-AS1P86434 159 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 HSF1Q00613 529 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 BMPR2Q13873 1038 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 E2F2Q14209 437 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 TMEM35AQ53FP2 167 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 RNFT1Q5M7Z0 435 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 MED27Q6P2C8 311 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 XKRXQ6PP77 449 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 LAS2Q8IYD9 372 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 OR14A16Q8NHC5 309 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF473Q8WTR7 871 aaKnown RBP13.34□□□□□ -0.27
ATG4B-218ENST00000479554 DCAKDQ8WVC6 231 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 DAZLQ92904 295 aaKnown RBP13.34□□□□□ -0.27
ATG4B-218ENST00000479554 TBCDQ9BTW9 1192 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 RUBCNLQ9H714 662 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 IGSF5Q9NSI5 407 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ZNF180Q9UJW8 692 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 YARS2Q9Y2Z4 477 aaKnown RBP13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ACOT9Q9Y305 439 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 MYO7BQ6PIF6 2116 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 APCP25054 2843 aa13.34□□□□□ -0.27
ATG4B-218ENST00000479554 ABCA12Q86UK0 2595 aa13.33□□□□□ -0.27
ATG4B-218ENST00000479554 A0A087X1B8 175 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 RTCAO00442 366 aaKnown RBP13.33□□□□□ -0.28
ATG4B-218ENST00000479554 PEX1O43933 1283 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 PRKNO60260 465 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-218ENST00000479554 SH3BGRLO75368 114 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 TGFB1P01137 390 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 EPB42P16452 691 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 KRT15P19012 456 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 AGAP20933 346 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 HIST1H1TP22492 207 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-218ENST00000479554 ATP5A1P25705 553 aaKnown RBP13.33□□□□□ -0.28
ATG4B-218ENST00000479554 HTR1EP28566 365 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 PTGER1P34995 402 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 RFC3P40938 356 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 SSR2P43308 183 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 SERTAD2Q14140 314 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 FAM83EQ2M2I3 478 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 AP5B1Q2VPB7 878 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 LGSNQ5TDP6 509 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 HSDL2Q6YN16 418 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 CHSY3Q70JA7 882 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 CCDC91Q7Z6B0 441 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 UBE3DQ7Z6J8 389 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 MYLK4Q86YV6 388 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-218ENST00000479554 SULF2Q8IWU5 870 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 GPALPP1Q8IXQ4 340 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms