RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 OR3A3P47888 321 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 MYL7Q01449 175 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 AKAP17AQ02040 695 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 MAP2K1Q02750 393 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 RPA4Q13156 261 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 SRSF9Q13242 221 aaKnown RBP eCLIP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 TEAD2Q15562 447 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 DEFB115Q30KQ5 88 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 LRRC38Q5VT99 294 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 ARHGAP17Q68EM7 881 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 FAM89BQ8N5H3 189 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 LRTM2Q8N967 370 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 ADAD2Q8NCV1 583 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 LPCAT1Q8NF37 534 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR7A2PQ8NGA2 310 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR2T11Q8NH01 316 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR4C3Q8NH37 302 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR1L3Q8NH93 324 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 METTL21AQ8WXB1 218 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 DCPSQ96C86 337 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 CDKN2AIPNLQ96HQ2 116 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 RBM41Q96IZ5 413 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 CAPNS2Q96L46 248 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 C10orf90Q96M02 699 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 PANX3Q96QZ0 392 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 RNF121Q9H920 327 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 PPANQ9NQ55 473 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 PDRG1Q9NUG6 133 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 OR6C2Q9NZP2 312 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 STX8Q9UNK0 236 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
CDC42BPA-212ENST00000478573 A0A087X0K7 114 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 H0YIG0 161 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 EPHB6O15197 1021 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 KHDRBS3O75525 346 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 AP2A2O94973 939 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 FAM157CP0CG43 387 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 PRSS56P0CW18 603 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 CLDN17P56750 224 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 ARF5P84085 180 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 AP1B1Q10567 949 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 CETN1Q12798 172 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 TRIM29Q14134 588 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 EXT1Q16394 746 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 SGCBQ16585 318 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 CAVIN4Q5BKX8 364 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 AGAP6Q5VW22 663 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 CST9Q5W186 159 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 TMEM207Q6UWW9 146 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 APLFQ8IW19 511 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 CERS5Q8N5B7 392 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC37A3Q8NCC5 494 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 KIAA0895Q8NCT3 520 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 KBTBD8Q8NFY9 601 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 PSMA8Q8TAA3 256 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 SAP25Q8TEE9 199 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 LGALS12Q96DT0 336 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 LPAR4Q99677 370 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 PRMT1Q99873 361 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 ALKBH7Q9BT30 221 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 C5orf66Q9H5L9 145 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 ATP13A3Q9H7F0 1226 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 AKIRIN1Q9H9L7 192 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 RAB9BQ9NP90 201 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 EXOC1Q9NV70 894 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 SLC12A6Q9UHW9 1150 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 PILRBQ9UKJ0 227 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 PRDM4Q9UKN5 801 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 FBXW2Q9UKT8 454 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 ELF5Q9UKW6 265 aaPredicted RBP3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 C2CD2Q9Y426 696 aa3.53□□□□□ -1.84
CDC42BPA-212ENST00000478573 LRRC37A2A6NM11 1700 aa3.53□□□□□ -1.85
CDC42BPA-212ENST00000478573 GAKO14976 1311 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 A0A0A6YYC8 382 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 SMIM30A4D0T7 59 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 MTMR11A4FU01 709 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ANKDD1BA6NHY2 528 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 I3L1I5 382 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 FPGTO14772 594 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 TEX28O15482 410 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 KERAO60938 352 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 RAF1P04049 648 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PATE4P0C8F1 98 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 ELAVL4P26378 380 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 RBMS1P29558 406 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 CTNNB1P35222 781 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 SERPINB6P35237 376 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 DNA2P51530 1060 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 HUNKP57058 714 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 RPP38P78345 283 aaKnown RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 NPRL3Q12980 569 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PPA1Q15181 289 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 STXBP2Q15833 593 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 FKBP1CQ5VVH2 108 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 KCTD11Q693B1 232 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PM20D1Q6GTS8 502 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 PSRC1Q6PGN9 363 aaPredicted RBP3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 SLC25A47Q6Q0C1 308 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 LEKR1Q6ZMV7 388 aa3.52□□□□□ -1.85
CDC42BPA-212ENST00000478573 SH2D5Q6ZV89 423 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms