RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PGRMC2O15173 223 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 AIFM1O95831 613 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 KRT6AP02538 564 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 KRT6BP04259 564 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 SOX11P35716 441 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 SERPINB4P48594 390 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 KRT6CP48668 564 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 SLC26A5P58743 744 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 RAE1P78406 368 aaKnown RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ACTN3Q08043 901 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 CSTF3Q12996 717 aaKnown RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ARL13AQ5H913 290 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 C10orf62Q5T681 223 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 VWA5B1Q5TIE3 1220 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 FCRLBQ6BAA4 426 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 PLAG1Q6DJT9 500 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 CYP20A1Q6UW02 462 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 DGAT2L6Q6ZPD8 337 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 OR6Y1Q8NGX8 325 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ADAMTS18Q8TE60 1221 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 DOK4Q8TEW6 326 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 CHTF18Q8WVB6 975 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ARL8AQ96BM9 186 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 CNDP1Q96KN2 507 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 LPAR4Q99677 370 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ALOXE3Q9BYJ1 711 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 TUBB1Q9H4B7 451 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 KCNK9Q9NPC2 374 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 PLA2G3Q9NZ20 509 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 VPS29Q9UBQ0 182 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF223Q9UK11 482 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ADAM29Q9UKF5 820 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 MRPS33Q9Y291 106 aaKnown RBP9.07□□□□□ -0.96
HDAC3-208ENST00000476739 STK38LQ9Y2H1 464 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 FIS1Q9Y3D6 152 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF451Q9Y4E5 1061 aa9.07□□□□□ -0.96
HDAC3-208ENST00000476739 CPAMD8Q8IZJ3 1885 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 TLN1Q9Y490 2541 aaKnown RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 SAGE2PA6NJ88 616 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 A8MUI8 341 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 PYCARD-AS1I3L0S3 204 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 SUV39H1O43463 412 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 ITM2AO43736 263 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 NPHS1O60500 1241 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 LYPLA1O75608 230 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 MYO1DO94832 1006 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 F10P00742 488 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 MYZAPP0CAP1 466 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 DHRS4L1P0CG22 281 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 UROSP10746 265 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 HSD3B1P14060 373 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 H2AFXP16104 143 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 HSD3B2P26439 372 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 GPR143P51810 404 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 NAA20P61599 178 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 IGLV3-21P80748 117 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 FOLH1Q04609 750 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 BTKQ06187 659 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 STX4Q12846 297 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 KLRB1Q12918 225 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 CCNYL2Q5T2Q4 361 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 AGAP7PQ5VUJ5 663 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 KANK2Q63ZY3 851 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 IGFL2Q6UWQ7 119 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 IGFL3Q6UXB1 125 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 ZNF321PQ8N8H1 164 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 Q8NA96 180 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 APCDD1LQ8NCL9 501 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 CATSPER1Q8NEC5 780 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 OR2T11Q8NH01 316 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 M1APQ8TC57 530 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 AGR3Q8TD06 166 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 ELP5Q8TE02 316 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 PTPMT1Q8WUK0 201 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 PPWD1Q96BP3 646 aaKnown RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 TM4SF18Q96CE8 201 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 TLCD1Q96CP7 247 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 C11orf24Q96F05 449 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 AGAP4Q96P64 663 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 EBPLQ9BY08 206 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 C20orf27Q9GZN8 174 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 RPF2Q9H7B2 306 aaKnown RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 MMP25Q9NPA2 562 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 LYARQ9NX58 379 aaKnown RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 MS4A12Q9NXJ0 267 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 AHSPQ9NZD4 102 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 C5AR2Q9P296 337 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 VTI1BQ9UEU0 232 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 PHF11Q9UIL8 331 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 G3BP2Q9UN86 482 aaKnown RBP9.06□□□□□ -0.96
HDAC3-208ENST00000476739 CCL27Q9Y4X3 112 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 PCDHGB7Q9Y5F8 929 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 ACTL7BQ9Y614 415 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 BOD1L1Q8NFC6 3051 aa9.06□□□□□ -0.96
HDAC3-208ENST00000476739 ERICH4A6NGS2 130 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms