RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 BST1Q10588 318 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 SMCO1Q147U7 214 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 RPS6KA1Q15418 735 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 MPPED2Q15777 294 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 GOLGA7BQ2TAP0 167 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 DCAF10Q5QP82 559 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 TCEAL6Q6IPX3 200 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 LINC00299Q6ZSB3 139 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 AMIGO1Q86WK6 493 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 SVOPQ8N4V2 548 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF276Q8N554 614 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 TMEM156Q8N614 296 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 BHLHE22Q8NFJ8 381 aaPredicted RBP4.65□□□□□ -1.66
NPHP3-206ENST00000474871 GLYATL2Q8WU03 294 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 FAM151AQ8WW52 585 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 NR4A3Q92570 626 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 PERPQ96FX8 193 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 SERPINI1Q99574 410 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 HINFPQ9BQA5 517 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 B3GNT5Q9BYG0 378 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 MAGEB5Q9BZ81 275 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 HDHD2Q9H0R4 259 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF768Q9H5H4 540 aaKnown RBP4.65□□□□□ -1.66
NPHP3-206ENST00000474871 CHMP1AQ9HD42 196 aaPredicted RBP4.65□□□□□ -1.66
NPHP3-206ENST00000474871 RNF215Q9Y6U7 377 aa4.65□□□□□ -1.66
NPHP3-206ENST00000474871 A0A1B0GVM2 712 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ISPDA4D126 451 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 C9orf172C9J069 976 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 OR10H3O60404 316 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 IL18BPO95998 194 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SOD2P04179 222 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 S100A8P05109 93 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SERPING1P05155 500 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ZSCAN5DPP0CG00 497 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ME2P23368 584 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ERP29P30040 261 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 GMPRP36959 345 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 RAP1AP62834 184 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 BTKQ06187 659 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 CARTPTQ16568 116 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 KNOP1Q1ED39 458 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 HNRNPA1L2Q32P51 320 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 GLRA4Q5JXX5 417 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ARL6IP4Q66PJ3 421 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 LPCAT3Q6P1A2 487 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM270Q6UE05 265 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 GDPD4Q6W3E5 623 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 RNF165Q6ZSG1 346 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TFAP2DQ7Z6R9 452 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 CARM1Q86X55 608 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SLITRK4Q8IW52 837 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ZC3H7AQ8IWR0 971 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 GPC2Q8N158 579 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 RDH13Q8NBN7 331 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 OR6Q1Q8NGQ2 317 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TRMT10AQ8TBZ6 339 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 OIT3Q8WWZ8 545 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PABPC5Q96DU9 382 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM169Q96HH4 297 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PRMT1Q99873 361 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 HDHD5Q9BXW7 423 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PDP1Q9P0J1 537 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SERTAD1Q9UHV2 236 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SLC13A4Q9UKG4 626 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 FBXL3Q9UKT7 428 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ARL2BPQ9Y2Y0 163 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PEX16Q9Y5Y5 336 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SPACA6W5XKT8 324 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 A0A1W2PPQ1 181 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 KLRC4-KLRK1H3BQV0 150 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ZBTB5O15062 677 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 SLC16A4O15374 487 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TGFB1I1O43294 461 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PPP1R11O60927 126 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TRIM3O75382 744 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 C6orf47O95873 294 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 H2AFZP0C0S5 128 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ARAFP10398 606 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ZNF7P17097 686 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 ADH6P28332 368 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 CD200P41217 278 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TECP42680 631 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 GPR15P49685 360 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 VEGFCP49767 419 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PER3P56645 1201 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PAN2Q504Q3 1202 aaKnown RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 MPPE1Q53F39 396 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 MAP1SQ66K74 1059 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 TMEM26Q6ZUK4 368 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 H2AFVQ71UI9 128 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 CORO2AQ92828 525 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 RNF145Q96MT1 663 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 PWWP2AQ96N64 755 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 GAD1Q99259 594 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 MESP1Q9BRJ9 268 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 NT5C1AQ9BXI3 368 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 JMJD4Q9H9V9 463 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 JPH1Q9HDC5 661 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-206ENST00000474871 CCNB1IP1Q9NPC3 277 aa4.65□□□□□ -1.67
NPHP3-206ENST00000474871 NLGN3Q9NZ94 848 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms