RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SOCS5O75159 536 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 PEX11AO75192 247 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 IFNB1P01574 187 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 LYNP07948 512 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 B4GALT1P15291 398 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 TNNI3P19429 210 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 C4BPBP20851 252 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 HSPA1LP34931 641 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CDKN1AP38936 164 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ACADSBP45954 432 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 HMGN5P82970 282 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 MYBPC1Q00872 1141 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 GABPB1Q06547 395 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 MFGE8Q08431 387 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 KLHL30Q0D2K2 578 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 PDZK1IP1Q13113 114 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 GCKRQ14397 625 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 PDIA5Q14554 519 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 RBBP5Q15291 538 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 OR1C1Q15619 314 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 TPD52L1Q16890 204 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 SGSM1Q2NKQ1 1148 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CMPK2Q5EBM0 449 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 RIPPLY2Q5TAB7 128 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ARHGAP17Q68EM7 881 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 FIP1L1Q6UN15 594 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 FAM159AQ6UWV7 190 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 LCA5Q86VQ0 697 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ZC3H3Q8IXZ2 948 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 TCP11Q8WWU5 503 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 VPS39Q96JC1 886 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 MAGED4Q96JG8 741 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CXorf58Q96LI9 332 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 TAAR6Q96RI8 345 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CBWD1Q9BRT8 395 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 THUMPD2Q9BTF0 503 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 SIRPDQ9H106 197 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ECT2Q9H8V3 914 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ZNF556Q9HAH1 456 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 VAT1LQ9HCJ6 419 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 SLC35D1Q9NTN3 355 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 C2orf42Q9NWW7 574 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 TEX10Q9NXF1 929 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CHMP5Q9NZZ3 219 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CLIP2Q9UDT6 1046 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ZNF490Q9ULM2 529 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 DDX49Q9Y6V7 483 aaKnown RBP3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ZHX2Q9Y6X8 837 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 CCDC7Q96M83 1385 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 DISP3Q9P2K9 1392 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 NINLQ9Y2I6 1382 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 ABCA5Q8WWZ7 1642 aa3.73□□□□□ -1.81
BRCA1-212ENST00000473961 BAZ1AQ9NRL2 1556 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GREB1LQ9C091 1923 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 NCOA1Q15788 1441 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 A0A087WW49 117 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 YJEFN3A6XGL0 299 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 PMS2P5A8MQ11 134 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 TMCO5BA8MYB1 307 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 KPNA7A9QM74 516 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 F8WDY8 70 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 BMPR1BO00238 502 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GRID2O43424 1007 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 MTRF1O75570 445 aaKnown RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 KRT6BP04259 564 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GSTA1P08263 222 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ERVK-10P10266 1014 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 HSPA5P11021 654 aaKnown RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 MBL2P11226 248 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GP9P14770 177 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GJB2P29033 226 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ADSSP30520 456 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 AKT2P31751 481 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 CCKARP32238 428 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GPR183P32249 361 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 OR1D2P34982 312 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SLC6A8P48029 635 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 KRT6CP48668 564 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 PAX9P55771 341 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ARL16Q0P5N6 197 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SPP2Q13103 211 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 BTG3Q14201 252 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 C3AR1Q16581 482 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SHROOM1Q2M3G4 852 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-212ENST00000473961 STPG1Q5TH74 334 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 CDC42EP5Q6NZY7 148 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ASRGL1Q7L266 308 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ZER1Q7Z7L7 766 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 HOGA1Q86XE5 327 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 LACC1Q8IV20 430 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 MISPQ8IVT2 679 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SLC22A15Q8IZD6 547 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 ICA1LQ8NDH6 482 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 OR4L1Q8NH43 312 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 RDH11Q8TC12 318 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 SMPDL3AQ92484 453 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 NECTIN4Q96NY8 510 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 GPA33Q99795 319 aa3.72□□□□□ -1.81
BRCA1-212ENST00000473961 FICDQ9BVA6 458 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms