RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PROM1O43490 865 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 PRMT3O60678 531 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SEMA3DO95025 777 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SERPINB4P48594 390 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 SKP1P63208 163 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 RAE1P78406 368 aaKnown RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 HMGCS1Q01581 520 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 AP5B1Q2VPB7 878 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SFT2D3Q587I9 215 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 TTC19Q6DKK2 380 aaPredicted RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 RIPOR1Q6ZS17 1223 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 MMP21Q8N119 569 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 ANKRD42Q8N9B4 389 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SRFBP1Q8NEF9 429 aaKnown RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 NFAM1Q8NET5 270 aaPredicted RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 ANKRD9Q96BM1 317 aaPredicted RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 C11orf24Q96F05 449 aaPredicted RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 APIPQ96GX9 242 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SERPINI1Q99574 410 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 PAIP2Q9BPZ3 127 aaKnown RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 SLC29A3Q9BZD2 475 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 C20orf27Q9GZN8 174 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 TUBB1Q9H4B7 451 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 BRF2Q9HAW0 419 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 EML4Q9HC35 981 aaKnown RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 ATP13A2Q9NQ11 1180 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 PRDM9Q9NQV7 894 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SNX6Q9UNH7 406 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 SLC12A4Q9UP95 1085 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 CCL27Q9Y4X3 112 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 PCDHGA9Q9Y5G4 932 aaKnown RBP12.29□□□□□ -0.44
TPM3-216ENST00000473036 NBPF19A0A087WUL8 3843 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 NSG1A0A0A6YYJ2 146 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ARHGAP10A1A4S6 786 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 SERTM1A2A2V5 107 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 WDR91A4D1P6 747 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ITM2AO43736 263 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 LDB3O75112 727 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 KLK1P06870 262 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 CYC1P08574 325 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 PRR35P0CG20 571 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ITGAMP11215 1152 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 TSFMP43897 325 aaKnown RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ARFIP1P53367 373 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 RRADP55042 308 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ID2Q02363 134 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 TGM3Q08188 693 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 AIMP2Q13155 320 aaKnown RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 MYBPC3Q14896 1274 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 ARL13AQ5H913 290 aaPredicted RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 TCTN3Q6NUS6 607 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 DGAT2L6Q6ZPD8 337 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 COMMD6Q7Z4G1 85 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 CLNKQ7Z7G1 428 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 CUZD1Q86UP6 607 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 OR4N5Q8IXE1 308 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 CHTF18Q8WVB6 975 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 THOC3Q96J01 351 aaKnown RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 CNDP1Q96KN2 507 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 SMAD5Q99717 465 aaKnown RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 NPAS2Q99743 824 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 SLC25A23Q9BV35 468 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 COPS7BQ9H9Q2 264 aaPredicted RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 PRTFDC1Q9NRG1 225 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 TEX10Q9NXF1 929 aaPredicted RBP12.28□□□□□ -0.44
TPM3-216ENST00000473036 GPR83Q9NYM4 423 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 CSAG2Q9Y5P2 127 aa12.28□□□□□ -0.44
TPM3-216ENST00000473036 A0A088AWK7 358 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 BLACEA4D250 179 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 GLOD5A6NK44 160 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 A8MUA0 341 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 MKRN2OSH3BPM6 223 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 PSMD12O00232 456 aaPredicted RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 KLF11O14901 512 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 PGRMC2O15173 223 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 FGF17O60258 216 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 MAN1A2O60476 641 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 NPHS1O60500 1241 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 CTNSO60931 367 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 ULK1O75385 1050 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 LYPLA1O75608 230 aaPredicted RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 KRT6AP02538 564 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 KRT6BP04259 564 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 FAM58BPP0C7Q3 252 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 ZNF10P21506 573 aaPredicted RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 JAK1P23458 1154 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 ITGA3P26006 1051 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 HMOX2P30519 316 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 KRT6CP48668 564 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 GPR143P51810 404 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 OR4D2P58180 307 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 PHEXP78562 749 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 TNFRSF17Q02223 184 aa12.27□□□□□ -0.45
TPM3-216ENST00000473036 C10orf62Q5T681 223 aaPredicted RBP12.27□□□□□ -0.45
TPM3-216ENST00000473036 B3GNTL1Q67FW5 361 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms