RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 A0A0G2JN53 185 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 RNF212BA8MTL3 300 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 CTNSO60931 367 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 HAUS5O94927 633 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 SAT1P21673 171 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 STXBP1P61764 594 aaKnown RBP17.46■□□□□ 0.39
SORT1-203ENST00000471996 CBLBQ13191 982 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 SF3B4Q15427 424 aaKnown RBP eCLIP17.46■□□□□ 0.391e-9■■□□□ 11.6
SORT1-203ENST00000471996 SEL1L2Q5TEA6 688 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 PRAMEF20Q5VT98 475 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 PM20D2Q8IYS1 436 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 RASGEF1CQ8N431 466 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 SLC2A12Q8TD20 617 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 ZNF669Q96BR6 464 aaPredicted RBP17.46■□□□□ 0.39
SORT1-203ENST00000471996 ALOXE3Q9BYJ1 711 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 PRDM14Q9GZV8 571 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 PROK2Q9HC23 129 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 EIF3LQ9Y262 564 aaKnown RBP17.46■□□□□ 0.39
SORT1-203ENST00000471996 ZANQ9Y493 2812 aa17.46■□□□□ 0.39
SORT1-203ENST00000471996 MYOCOSA0A1B0GUC4 107 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 SH3D21A4FU49 640 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 MBD3L4A6NDZ8 208 aaPredicted RBP17.45■□□□□ 0.38
SORT1-203ENST00000471996 MBD3L3A6NE82 208 aaPredicted RBP17.45■□□□□ 0.38
SORT1-203ENST00000471996 MBD3L5A6NJ08 208 aaPredicted RBP17.45■□□□□ 0.38
SORT1-203ENST00000471996 CD8B2A6NJW9 211 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 CYR61O00622 381 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 AP1S2P56377 157 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 ASPHQ12797 758 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 PAQR3Q6TCH7 311 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 NXPE4Q6UWF7 544 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 PHC2Q8IXK0 858 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 MBD3L2Q8NHZ7 208 aaPredicted RBP17.45■□□□□ 0.38
SORT1-203ENST00000471996 ATL1Q8WXF7 558 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 FBXL8Q96CD0 374 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 RBM24Q9BX46 236 aaKnown RBP17.45■□□□□ 0.38
SORT1-203ENST00000471996 FBXO5Q9UKT4 447 aa17.45■□□□□ 0.38
SORT1-203ENST00000471996 EML6Q6ZMW3 1958 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 ZCWPW2A0A1B0GU75 182 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 MAGEB16A2A368 324 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 PABPN1LA6NDY0 278 aaKnown RBP17.44■□□□□ 0.38
SORT1-203ENST00000471996 C17orf105B2RV13 164 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 CASKO14936 926 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 ERI3O43414 337 aaKnown RBP17.44■□□□□ 0.38
SORT1-203ENST00000471996 B3GALT2O43825 422 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 TNNI3P19429 210 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 STX4Q12846 297 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 CCNG2Q16589 344 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 LYPD8Q6UX82 237 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 TMPRSS11BQ86T26 416 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 LMNTD2Q8IXW0 634 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 KLHDC8AQ8IYD2 350 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 MS4A6EQ96DS6 147 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 LINGO1Q96FE5 620 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 PERPQ96FX8 193 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 JSRP1Q96MG2 331 aaPredicted RBP17.44■□□□□ 0.38
SORT1-203ENST00000471996 QRFPRQ96P65 431 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 CSF3RQ99062 836 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 CNIH4Q9P003 139 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 DYRK1BQ9Y463 629 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 MAD1L1Q9Y6D9 718 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 NBEAL1Q6ZS30 2694 aa17.44■□□□□ 0.38
SORT1-203ENST00000471996 A0A088AWK7 358 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 C1QAP02745 245 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 ZNF10P21506 573 aaPredicted RBP17.43■□□□□ 0.38
SORT1-203ENST00000471996 HNRNPH1P31943 449 aaKnown RBP17.43■□□□□ 0.38
SORT1-203ENST00000471996 LIM2P55344 173 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 EFTUD2Q15029 972 aaKnown RBP eCLIP17.43■□□□□ 0.381e-11■■■□□ 19.1
SORT1-203ENST00000471996 DRICH1Q6PGQ1 229 aaPredicted RBP17.43■□□□□ 0.38
SORT1-203ENST00000471996 NUBPLQ8TB37 319 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 SLC22A8Q8TCC7 542 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 CALML6Q8TD86 181 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 ZNF721Q8TF20 911 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 SPACA9Q96E40 222 aaPredicted RBP17.43■□□□□ 0.38
SORT1-203ENST00000471996 TRIB1Q96RU8 372 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 NDNQ99608 321 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 CCL19Q99731 98 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 TRIM54Q9BYV2 358 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 GALNT8Q9NY28 637 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 TAS2R13Q9NYV9 303 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 COPS7AQ9UBW8 275 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 DAPP1Q9UN19 280 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 MXRA5Q9NR99 2828 aa17.43■□□□□ 0.38
SORT1-203ENST00000471996 ARID1AO14497 2285 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 LRIT2A6NDA9 550 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 ETHE1O95571 254 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 CNOT4O95628 575 aaKnown RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 FPR1P21462 350 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 GDF1P27539 372 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 SARNPP82979 210 aaKnown RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 RCN2Q14257 317 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 ACKR1Q16570 336 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 VASNQ6EMK4 673 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 SYDE1Q6ZW31 735 aaPredicted RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 GSTA5Q7RTV2 222 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 CAND1Q86VP6 1230 aaKnown RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 THOC6Q86W42 341 aaKnown RBP17.42■□□□□ 0.38
SORT1-203ENST00000471996 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.42■□□□□ 0.38
SORT1-203ENST00000471996 SLC15A4Q8N697 577 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 RUNDC3BQ96NL0 473 aa17.42■□□□□ 0.38
SORT1-203ENST00000471996 SECISBP2Q96T21 854 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms