RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 CTAG1AP78358 180 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 BASP1P80723 227 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 TSPY1Q01534 308 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZNF45Q02386 682 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 OCA2Q04671 838 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PRKCDQ05655 676 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 INCA1Q0VD86 236 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ITGADQ13349 1161 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 AQP6Q13520 282 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GALNT3Q14435 633 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CYTH1Q15438 398 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SMUG1Q53HV7 270 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ARL13AQ5H913 290 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 TMEM196Q5HYL7 178 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 MDH1BQ5I0G3 518 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NDUFAF5Q5TEU4 345 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 VWA5B1Q5TIE3 1220 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GPR107Q5VW38 600 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ANKS6Q68DC2 871 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 FAM111BQ6SJ93 734 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TMEM270Q6UE05 265 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TMEM108Q6UXF1 575 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 RNF165Q6ZSG1 346 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZCCHC23Q6ZST2 131 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TPRG1Q6ZUI0 275 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TMEM26Q6ZUK4 368 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PARS2Q7L3T8 475 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 SLC51BQ86UW2 128 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 STK32CQ86UX6 486 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 DHFR2Q86XF0 187 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 FUNDC1Q8IVP5 155 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CTAGE3PQ8IX95 158 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SPEM1Q8N4L4 309 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 AADATQ8N5Z0 425 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 DPP10Q8N608 796 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 MRPL43Q8N983 215 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 AVL9Q8NBF6 648 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 KCTD6Q8NC69 237 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 OR52N2Q8NGI0 321 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GRPEL2Q8TAA5 225 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SETD6Q8TBK2 473 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 DYNC2LI1Q8TCX1 351 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 URGCPQ8TCY9 931 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 BLOC1S5Q8TDH9 187 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CHURC1Q8WUH1 139 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CANT1Q8WVQ1 401 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ST8SIA2Q92186 375 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 TFAP2BQ92481 460 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NACC2Q96BF6 587 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 RCN3Q96D15 328 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 HDAC11Q96DB2 347 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZNF845Q96IR2 970 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 CEP170P1Q96L14 293 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 C1orf74Q96LT6 269 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 MCEEQ96PE7 176 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZNF300Q96RE9 604 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 PEBP4Q96S96 227 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 DHRS9Q9BPW9 319 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 FAM118BQ9BPY3 351 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PI4K2AQ9BTU6 479 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 KIFC1Q9BW19 673 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SLIRPQ9GZT3 109 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 SLC25A18Q9H1K4 315 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 MMP27Q9H306 513 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ARMC7Q9H6L4 198 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SLA2Q9H6Q3 261 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SYNDIG1Q9H7V2 258 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NOL11Q9H8H0 719 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 LRRC40Q9H9A6 602 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 NTN4Q9HB63 628 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 CYP4F11Q9HBI6 524 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SNX15Q9NRS6 342 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 SLC22A11Q9NSA0 550 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
SORT1-202ENST00000466471 MRPL15Q9P015 296 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 PLEKHB1Q9UF11 243 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZDHHC2Q9UIJ5 367 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 OSGIN1Q9UJX0 560 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 FBXO5Q9UKT4 447 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 MRPS17Q9Y2R5 130 aaKnown RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 AP3M1Q9Y2T2 418 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 GRIP1Q9Y3R0 1128 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ANGPTL3Q9Y5C1 460 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PCDHB7Q9Y5E2 793 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 AUP1Q9Y679 476 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 KCNE2Q9Y6J6 123 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 ZFP37Q9Y6Q3 630 aaPredicted RBP3.3□□□□□ -1.88
SORT1-202ENST00000466471 MYH4Q9Y623 1939 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 MYO16Q9Y6X6 1858 aa3.3□□□□□ -1.88
SORT1-202ENST00000466471 PLXND1Q9Y4D7 1925 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 TBC1D3DA0A087WVF3 549 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 TBC1D3IA0A087WXS9 549 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 TBC1D3EA0A087X179 549 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 TBC1D3KA0A087X1G2 549 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 A0A096LPK6 155 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 PRAMEF33A0A0G2JMD5 474 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 C1orf232A0A0U1RR37 186 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 DHRS12A0PJE2 317 aa3.29□□□□□ -1.88
SORT1-202ENST00000466471 UBE2QL1A1L167 161 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms