RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PTGER1P34995 402 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 LIPAP38571 399 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 ST13P50502 369 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 CCR8P51685 355 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 REEP5Q00765 189 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 IRF4Q15306 451 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 MAPK11Q15759 364 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 ARMC8Q8IUR7 673 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 SVOPQ8N4V2 548 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 KIAA1958Q8N8K9 716 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 RHOXF1Q8NHV9 184 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 GGHQ92820 318 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 PDXPQ96GD0 296 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 C12orf66Q96MD2 445 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 FERD3LQ96RJ6 166 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 PIP5K1AQ99755 562 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 ARMC7Q9H6L4 198 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 FAIMQ9NVQ4 179 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 PSORS1C1Q9UIG5 152 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 ZFR2Q9UPR6 939 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 KCNK6Q9Y257 313 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 POFUT2Q9Y2G5 429 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 STON1Q9Y6Q2 735 aa17.78■□□□□ 0.44
TSPAN4-210ENST00000464987 PRKRAO75569 313 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 GADD45GO95257 159 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 SERPIND1P05546 499 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 SLC35G4P0C7Q5 338 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 HOXB3P14651 431 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 EN2P19622 333 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 ELOAQ14241 798 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 ARHGAP19Q14CB8 494 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 CST6Q15828 149 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 REEP3Q6NUK4 255 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 ADCK2Q7Z695 626 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 GPR32P1Q8NGA4 272 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 IPCEF1Q8WWN9 437 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 NEURL3Q96EH8 262 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 TMEM19Q96HH6 336 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 GPR83Q9NYM4 423 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 ENPP4Q9Y6X5 453 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 SCN3AQ9NY46 2000 aa17.77■□□□□ 0.44
TSPAN4-210ENST00000464987 SEMA3DO95025 777 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 GASTP01350 101 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 CD36P16671 472 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 ITGA2P17301 1181 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 GABRB1P18505 474 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 PXNP49023 591 aaPredicted RBP17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 PCBP4P57723 403 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 ATP1A4Q13733 1029 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 OLIG3Q7RTU3 272 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 SNX29P2Q8IUI4 249 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 HDDC3Q8N4P3 179 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 DNAJC22Q8N4W6 341 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 APOBEC4Q8WW27 367 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 SMPDL3AQ92484 453 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 BTBD2Q9BX70 525 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 TEX101Q9BY14 249 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 SERHL2Q9H4I8 314 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 PCDHGA4Q9Y5G9 962 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 M0R082 166 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 M0R3G1 203 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 KMOO15229 486 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 SLC22A1O15245 554 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 CSNK1G2P78368 415 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 ITGADQ13349 1161 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 C1QTNF12Q5T7M4 302 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 DCDC5Q6ZRR9 648 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 C6orf120Q7Z4R8 191 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 RBM45Q8IUH3 476 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 AQP11Q8NBQ7 271 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 OR5P2Q8WZ92 322 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 TEFMQ96QE5 360 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 NECTIN3Q9NQS3 549 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 IMP3Q9NV31 184 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 SPATA7Q9P0W8 599 aa17.76■□□□□ 0.43
TSPAN4-210ENST00000464987 NDUFS4O43181 175 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 CD72P21854 359 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 SOX9P48436 509 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 HMGA2P52926 109 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 HEPACAMQ14CZ8 416 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 PTGES3Q15185 160 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 UBE2UQ5VVX9 321 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 FAM46CQ5VWP2 391 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 CENPSQ8N2Z9 138 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 TMCO5AQ8N6Q1 288 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 ZNF513Q8N8E2 541 aaPredicted RBP17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 TP53I13Q8NBR0 393 aaPredicted RBP17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 DYNC2LI1Q8TCX1 351 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 PHF10Q8WUB8 498 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 OTUB1Q96FW1 271 aaPredicted RBP17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 ALPK1Q96QP1 1244 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 KLHL31Q9H511 634 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 IGFLR1Q9H665 355 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 WDR26Q9H7D7 661 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 SFXN1Q9H9B4 322 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 FAM32AQ9Y421 112 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 TRBV4-1A0A0J9YWV2 114 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 PRAMEF27A3QJZ7 478 aa17.75■□□□□ 0.43
TSPAN4-210ENST00000464987 OR52A4PA6NMU1 304 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms