RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TPT1P8Q9HAU6 139 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 TRIM39Q9HCM9 518 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 EVA1BQ9NVM1 165 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 MOSPD1Q9UJG1 213 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 UTS2RQ9UKP6 389 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 PCDHGB1Q9Y5G3 927 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 PCDHGA8Q9Y5G5 932 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 MAGED1Q9Y5V3 778 aaPredicted RBP9.44□□□□□ -0.9
PTPRD-207ENST00000463477 U3KQA8 63 aa9.44□□□□□ -0.9
PTPRD-207ENST00000463477 GABRR3A8MPY1 467 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
PTPRD-207ENST00000463477 MRPS14O60783 128 aaKnown RBP9.43□□□□□ -0.9
PTPRD-207ENST00000463477 E2F6O75461 281 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 RFPL3O75679 317 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ETHE1O95571 254 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 FABP3P05413 133 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 GP1BAP07359 652 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 CELA2BP08218 269 aaPredicted RBP9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ANXA4P09525 319 aaPredicted RBP9.43□□□□□ -0.9
PTPRD-207ENST00000463477 C1GALT1C1LP0DN25 315 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 LAMP1P11279 417 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 NPPBP16860 134 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ELK4P28324 431 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 PDHA2P29803 388 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 PIK3CBP42338 1070 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 IST1P53990 364 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ITGA1P56199 1179 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 TBPL1P62380 186 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 DAB2P98082 770 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 CTBSQ01459 385 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 RBBP4Q09028 425 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF763Q0D2J5 394 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 RPA4Q13156 261 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 DCTN2Q13561 401 aaKnown RBP9.43□□□□□ -0.9
PTPRD-207ENST00000463477 GTF2H3Q13889 308 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 PDE7AQ13946 482 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 KDM4DQ6B0I6 523 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 XKR5Q6UX68 686 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF621Q6ZSS3 439 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 TMPRSS7Q7RTY8 843 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 CACTIN-AS1Q8N1I8 211 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 C1orf52Q8N6N3 182 aaKnown RBP9.43□□□□□ -0.9
PTPRD-207ENST00000463477 PIK3C3Q8NEB9 887 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 NEIL2Q969S2 332 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ASPSCR1Q9BZE9 553 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 RMI1Q9H9A7 625 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ATAD3AQ9NVI7 634 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 CIDEBQ9UHD4 219 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 VPS4AQ9UN37 437 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ERVK-11Q9UQG0 969 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 TMEM98Q9Y2Y6 226 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ACACBO00763 2458 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 CHD8Q9HCK8 2581 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 ASXL3Q9C0F0 2248 aa9.43□□□□□ -0.9
PTPRD-207ENST00000463477 KRT87PA6NCN2 255 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 MGAT4DA6NG13 374 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GPR89AB7ZAQ6 455 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 E9PQ18 207 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 H3BMQ9 156 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HS6ST1O60243 411 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 PCDH7O60245 1069 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 NOBOXO60393 691 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 B3GALT4O96024 378 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GPR89BP0CG08 455 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ACADLP28330 430 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 PIGAP37287 484 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 PHEXP78562 749 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HPCAP84074 193 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CD47Q08722 323 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ILF3Q12906 894 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HIST2H2ACQ16777 129 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HIST2H2AA3Q6FI13 130 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 XAF1Q6GPH4 301 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 IKBIPQ70UQ0 350 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 TAF8Q7Z7C8 310 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 TMPRSS12Q86WS5 348 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 NRROSQ86YC3 692 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CROCCP3Q8IVE0 287 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 RNF175Q8N4F7 328 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 LILRA3Q8N6C8 439 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GPR156Q8NFN8 814 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 OR2L2Q8NH16 312 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CCL4L1Q8NHW4 92 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 RAB2BQ8WUD1 216 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 COG8Q96MW5 612 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 EPYCQ99645 322 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 BCL7BQ9BQE9 202 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GSDMCQ9BYG8 508 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 REEP4Q9H6H4 257 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GPN2Q9H9Y4 310 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 MYNNQ9NPC7 610 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 DMRT3Q9NQL9 472 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CDC14AQ9UNH5 594 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 PADI2Q9Y2J8 665 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 WBP11Q9Y2W2 641 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms