RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 F5H5T6 163 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 FABP7O15540 132 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 PLOD3O60568 738 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 PRAMEF1O95521 474 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 ZNF250P15622 560 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 SNRPGP62308 76 aaKnown RBP14.79□□□□□ -0.04
SSR4-206ENST00000460616 TWF1Q12792 350 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 CLLU1OSQ5K130 101 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 ANKRD54Q6NXT1 300 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 KCTD20Q7Z5Y7 419 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 ZNF680Q8NEM1 530 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 BADQ92934 168 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 SAMD11Q96NU1 681 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 ASB8Q9H765 288 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 PPP1R3EQ9H7J1 279 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 RABL2BQ9UNT1 228 aa14.79□□□□□ -0.04
SSR4-206ENST00000460616 RPL36Q9Y3U8 105 aaKnown RBP14.79□□□□□ -0.04
SSR4-206ENST00000460616 LOC102723532A0A0G2JNH3 316 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 PRR23AA6NEV1 266 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 NPIPB8E9PQR5 432 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 INMT-MINDY4F8WBC2 141 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 HMGCLP35914 325 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 FEN1P39748 380 aaKnown RBP14.78□□□□□ -0.04
SSR4-206ENST00000460616 ETV3P41162 512 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 LIMS1P48059 325 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 RGS1Q08116 209 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 SF1Q15637 639 aaKnown RBP14.78□□□□□ -0.04
SSR4-206ENST00000460616 CPTPQ5TA50 214 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 ZNF730Q6ZMV8 503 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 GPR137Q96N19 417 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 KATNB1Q9BVA0 655 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 RHCGQ9UBD6 479 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 HCSTQ9UBK5 93 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 ING4Q9UNL4 249 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 GABRR3A8MPY1 467 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 F8W810 466 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 TRIM77I1YAP6 450 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 CBX4O00257 560 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 B4GALT3O60512 393 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 ATF4P18848 351 aaPredicted RBP14.78□□□□□ -0.04
SSR4-206ENST00000460616 XCR1P46094 333 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 INPP1P49441 399 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 PPP3R1P63098 170 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 GAB1Q13480 694 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 CDH18Q13634 790 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 ZNF267Q14586 743 aaPredicted RBP14.78□□□□□ -0.04
SSR4-206ENST00000460616 MFSD13AQ14CX5 517 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 P2RY14Q15391 338 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 CNIH2Q6PI25 160 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 TMIGD1Q6UXZ0 262 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 C16orf59Q7L2K0 433 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 L3MBTL4Q8NA19 623 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 TMEM145Q8NBT3 493 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 ZNF431Q8TF32 576 aaPredicted RBP14.78□□□□□ -0.04
SSR4-206ENST00000460616 C1GALT1C1Q96EU7 318 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 MSANTD3Q96H12 275 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 NMNAT1Q9HAN9 279 aaPredicted RBP14.78□□□□□ -0.04
SSR4-206ENST00000460616 EVA1BQ9NVM1 165 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 BTNL2Q9UIR0 455 aa14.78□□□□□ -0.04
SSR4-206ENST00000460616 IGLV3-27P01718 113 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 C1SP09871 688 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 ETFAP13804 333 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 ENPP1P22413 925 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 ALDH6A1Q02252 535 aaKnown RBP14.77□□□□□ -0.04
SSR4-206ENST00000460616 IL18Q14116 193 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 ZXDCQ2QGD7 858 aaPredicted RBP14.77□□□□□ -0.04
SSR4-206ENST00000460616 LEXMQ3ZCV2 418 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 LRRC70Q7Z2Q7 622 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 TIGD4Q8IY51 512 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 FCRL1Q96LA6 429 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 SOSTQ9BQB4 213 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 TMEM43Q9BTV4 400 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 MED18Q9BUE0 208 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 SPNS1Q9H2V7 528 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 B3GAT2Q9NPZ5 323 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 PCDHB9Q9Y5E1 797 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 COL4A6Q14031 1691 aa14.77□□□□□ -0.04
SSR4-206ENST00000460616 CIB4A0PJX0 185 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 STK19P49842 368 aaPredicted RBP14.77□□□□□ -0.05
SSR4-206ENST00000460616 CAV3P56539 151 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 DEFB103AP81534 67 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 ZNF91Q05481 1191 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 SF3A2Q15428 464 aaKnown RBP14.77□□□□□ -0.05
SSR4-206ENST00000460616 COX20Q5RI15 118 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 FAM122CQ6P4D5 195 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 OTOP2Q7RTS6 562 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 CDH24Q86UP0 819 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 KIF18BQ86Y91 864 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 OR52P1PQ8NH57 321 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 GEMIN6Q8WXD5 167 aaKnown RBP14.77□□□□□ -0.05
SSR4-206ENST00000460616 FBXO32Q969P5 355 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 PHF21AQ96BD5 680 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 TSSK6Q9BXA6 273 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 VPS29Q9UBQ0 182 aa14.77□□□□□ -0.05
SSR4-206ENST00000460616 ZFP37Q9Y6Q3 630 aaPredicted RBP14.77□□□□□ -0.05
SSR4-206ENST00000460616 CPEP16870 476 aa14.76□□□□□ -0.05
SSR4-206ENST00000460616 ATF6P18850 670 aa14.76□□□□□ -0.05
SSR4-206ENST00000460616 SOX9P48436 509 aa14.76□□□□□ -0.05
SSR4-206ENST00000460616 NFATC2Q13469 925 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms