RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 H3BM21 787 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 SAP18O00422 153 aaKnown RBP18.18■□□□□ 0.5
SDCBP-204ENST00000447182 RGS5O15539 181 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 SEMA3DO95025 777 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF79Q15937 498 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 LEXMQ3ZCV2 418 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 RAB43Q86YS6 212 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 TMC8Q8IU68 726 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 SLC39A11Q8N1S5 342 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 NANOGP1Q8N7R0 232 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 PROKR2Q8NFJ6 384 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 NLNQ9BYT8 704 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 SLC6A16Q9GZN6 736 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 A4GALTQ9NPC4 353 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 CLEC2DQ9UHP7 191 aa18.18■□□□□ 0.5
SDCBP-204ENST00000447182 RPL36Q9Y3U8 105 aaKnown RBP18.18■□□□□ 0.5
SDCBP-204ENST00000447182 FAM227AF5H4B4 570 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 CXCL10P02778 98 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 KLK1P06870 262 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 TRAPPC2P0DI81 140 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 TRAPPC2BP0DI82 140 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 TIMP2P16035 220 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 RECQLP46063 649 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 MLLT11Q13015 90 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 TMEM220Q6QAJ8 160 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SLC34A3Q8N130 599 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 FAM181AQ8N9Y4 354 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 OR8J1Q8NGP2 316 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 VANGL1Q8TAA9 524 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 NEDD4LQ96PU5 975 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SRRQ9GZT4 340 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SPATA7Q9P0W8 599 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 TAAR2Q9P1P5 351 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SRRDQ9UH36 339 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 CACNB4O00305 520 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 FAAHO00519 579 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 IL3P08700 152 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 CKMT1AP12532 417 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 ELAVL4P26378 380 aaKnown RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 RPS5P46782 204 aaKnown RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 RUNX1T1Q06455 604 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 ARMC4Q5T2S8 1044 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 MFSD4BQ5TF39 518 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 CEACAM20Q6UY09 585 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.17■□□□□ 0.5
SDCBP-204ENST00000447182 AUTS2Q8WXX7 1259 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 NEURL3Q96EH8 262 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SCLYQ96I15 445 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 ST6GAL2Q96JF0 529 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SLC6A18Q96N87 628 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 EPHX3Q9H6B9 360 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 CXorf36Q9H7Y0 433 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SPG21Q9NZD8 308 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 SNX11Q9Y5W9 270 aa18.17■□□□□ 0.5
SDCBP-204ENST00000447182 KIF26AQ9ULI4 1882 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-204ENST00000447182 TPST2O60704 377 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 LEFTY1O75610 366 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 MFN2O95140 757 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 LGI1O95970 557 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 ALDH1A1P00352 501 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 HBQ1P09105 142 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SEC23BQ15437 767 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 BAK1Q16611 211 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 OCLNQ16625 522 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 DCST1Q5T197 706 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 C6orf183Q5T699 404 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 IER5LQ5T953 404 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SAXO2Q658L1 398 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 TCTN3Q6NUS6 607 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 ERAP2Q6P179 960 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 NXPE4Q6UWF7 544 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 VN1R5Q7Z5H4 357 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 LAX1Q8IWV1 398 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 LRRC56Q8IYG6 542 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-204ENST00000447182 LILRB4Q8NHJ6 448 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SLC38A5Q8WUX1 472 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SLC5A11Q8WWX8 675 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 TRMT61AQ96FX7 289 aaKnown RBP18.16■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF558Q96NG5 402 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 MIEF1Q9NQG6 463 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 DNAJC27Q9NZQ0 273 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 NOX1Q9Y5S8 564 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SEMA7AO75326 666 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 IL7P13232 177 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 DDX5P17844 614 aaKnown RBP18.16■□□□□ 0.5
SDCBP-204ENST00000447182 XKP51811 444 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 ZNF91Q05481 1191 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 ZMAT1Q5H9K5 638 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SPOUT1Q5T280 376 aaKnown RBP18.16■□□□□ 0.5
SDCBP-204ENST00000447182 THOC7Q6I9Y2 204 aaKnown RBP18.16■□□□□ 0.5
SDCBP-204ENST00000447182 CASP12Q6UXS9 341 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 DPPA4Q7L190 304 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 TMEM25Q86YD3 366 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 GPR32P1Q8NGA4 272 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SNTG1Q9NSN8 517 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 SSR3Q9UNL2 185 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 CMAHPQ9Y471 501 aa18.16■□□□□ 0.5
SDCBP-204ENST00000447182 AP3D1O14617 1153 aa18.15■□□□□ 0.5
SDCBP-204ENST00000447182 RB1P06400 928 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms