RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ITGA11Q9UKX5 1188 aa2.85□□□□□ -1.95
HMGB3P12-201ENST00000438745 NSG2Q9Y328 171 aa2.85□□□□□ -1.95
HMGB3P12-201ENST00000438745 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.85□□□□□ -1.95
HMGB3P12-201ENST00000438745 UMODL1Q5DID0 1318 aa2.85□□□□□ -1.95
HMGB3P12-201ENST00000438745 RLFQ13129 1914 aa2.85□□□□□ -1.95
HMGB3P12-201ENST00000438745 ANKRD36CQ5JPF3 1778 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 CEP250Q9BV73 2442 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 A4D1N5 150 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 C5orf52A6NGY3 159 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 MSGN1A6NI15 193 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 H0Y626 953 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 H3BMM5 538 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 PSMA7O14818 248 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 FLRT2O43155 660 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SEC24AO95486 1093 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 CLDN1O95832 211 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SUPT20HL2P0C7V6 817 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SP9P0CG40 484 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 PRKAR1AP10644 381 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 DUTP33316 252 aaKnown RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SOAT1P35610 550 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLC6A12P48065 614 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 FOLH1Q04609 750 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 YWHAHQ04917 246 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SULT2A1Q06520 285 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 TCP10Q12799 353 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SPP2Q13103 211 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 GPM6BQ13491 265 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 TMEM132DQ14C87 1099 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZNF74Q16587 644 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 CCDC158Q5M9N0 1113 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 FAM46CQ5VWP2 391 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 CASC4Q6P4E1 433 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZNF613Q6PF04 617 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLC25A47Q6Q0C1 308 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLC24A5Q71RS6 500 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 HOOK3Q86VS8 718 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZNF440Q8IYI8 595 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SPEM1Q8N4L4 309 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 MARVELD2Q8N4S9 558 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 GBP7Q8N8V2 638 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SUMF1Q8NBK3 374 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 OR2T6Q8NHC8 308 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 SLC26A7Q8TE54 656 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 P2RX5Q93086 422 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 TEKT1Q969V4 418 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 ZNF689Q96CS4 500 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 RBM41Q96IZ5 413 aaKnown RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 GDAP1L1Q96MZ0 367 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 BTBD9Q96Q07 612 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 PI4K2AQ9BTU6 479 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 FUCA2Q9BTY2 467 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 DGCR6LQ9BY27 220 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 MTMR12Q9C0I1 747 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 RAVER2Q9HCJ3 691 aaKnown RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 MAN2C1Q9NTJ4 1040 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 PLCXD1Q9NUJ7 323 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 ERAP1Q9NZ08 941 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 RAB23Q9ULC3 237 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 COLEC10Q9Y6Z7 277 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 PCNX3Q9H6A9 2034 aa2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 COL4A4P53420 1690 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P12-201ENST00000438745 ELP1O95163 1332 aa2.84□□□□□ -1.96
HMGB3P12-201ENST00000438745 TEP1Q99973 2627 aaKnown RBP2.84□□□□□ -1.96
HMGB3P12-201ENST00000438745 NUP98P52948 1817 aa2.84□□□□□ -1.96
HMGB3P12-201ENST00000438745 TDRD15B5MCY1 1934 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 CHD9Q3L8U1 2897 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 PTPN13Q12923 2485 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 ANKRD17O75179 2603 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 TMEM150CB9EJG8 249 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 CTDSPLO15194 276 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 SLC7A4O43246 635 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 PI15O43692 258 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 ASGR1P07306 291 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 DLATP10515 647 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 RPL35AP18077 110 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 EIF2S2P20042 333 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 MUTP22033 750 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 CDX1P47902 265 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 LEPRP48357 1165 aaKnown RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 PAX9P55771 341 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 XGP55808 180 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 LMO4P61968 165 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 IL10RBQ08334 325 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 TRIM29Q14134 588 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 SLC1A5Q15758 541 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 SGSM1Q2NKQ1 1148 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 PDLIM3Q53GG5 364 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF542PQ5EBM4 170 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 C1QTNF12Q5T7M4 302 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 FKBP1CQ5VVH2 108 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 FUT10Q6P4F1 479 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 PRSS55Q6UWB4 352 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 MSANTD1Q6ZTZ1 278 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 OTOAQ7RTW8 1153 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 TMCO2Q7Z6W1 182 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 TUSC5Q8IXB3 177 aa2.83□□□□□ -1.96
HMGB3P12-201ENST00000438745 RCOR2Q8IZ40 523 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms