RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 GABARAPL1Q9H0R8 117 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ITM2CQ9NQX7 267 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 KRT84Q9NSB2 600 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ZNF282Q9UDV7 671 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 GMPPBQ9Y5P6 360 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 DNMT3AQ9Y6K1 912 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 CCDC88CQ9P219 2028 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 LATO43561 262 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 GCM2O75603 506 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ITIH1P19827 911 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 RYKP34925 604 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 OR1E2P47887 323 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ITGA1P56199 1179 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 GABARAPL2P60520 117 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 FOXD4Q12950 439 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 HIST2H2ACQ16777 129 aaPredicted RBP13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 MPEG1Q2M385 716 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 B3GNT8Q7Z7M8 397 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ADCK1Q86TW2 530 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 LAS2Q8IYD9 372 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 C11orf65Q8NCR3 313 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 UBE2FQ969M7 185 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 PPCDCQ96CD2 204 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 C7orf34Q96L11 122 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 TPK1Q9H3S4 243 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 OSGEPL1Q9H4B0 414 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ABCB10Q9NRK6 738 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 RASSF1Q9NS23 344 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ADPRHL2Q9NX46 363 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 ANKMY1Q9P2S6 941 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 MOSPD1Q9UJG1 213 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 MAP4K5Q9Y4K4 846 aa13.23□□□□□ -0.29
PTCHD3-201ENST00000438700 FOXE1O00358 373 aaPredicted RBP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 GABARAPO95166 117 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 CEACAM5P06731 702 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 FURINP09958 794 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 RRM2P31350 389 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 ACSL1P33121 698 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 MASP1P48740 699 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 CLCNKAP51800 687 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 MVDP53602 400 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 CYP4F2P78329 520 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PRSS53Q2L4Q9 553 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 FBXO43Q4G163 708 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PRAMEF14Q5SWL7 426 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PRAMEF13Q5VWM6 474 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 DCUN1D3Q8IWE4 304 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 OR6Q1Q8NGQ2 317 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 C16orf78Q8WTQ4 265 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 BHLHE41Q9C0J9 482 aaPredicted RBP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 TRIT1Q9H3H1 467 aaKnown RBP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 MMP17Q9ULZ9 603 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 CORO2BQ9UQ03 480 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 TESMINQ9Y4I5 508 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 NOX1Q9Y5S8 564 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 NINQ8N4C6 2090 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 TMEM229AB2RXF0 380 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 KLHL18O94889 574 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC35G4P0C7Q5 338 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 GLULP15104 373 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 GABRG2P18507 467 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PPIBP23284 216 aaKnown RBP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PSMB9P28065 219 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PCGF2P35227 344 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 SOAT1P35610 550 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 PCYT1AP49585 367 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 TPMTP51580 245 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 IL18R1Q13478 541 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 IQCCQ4KMZ1 466 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 NANOGNBQ7Z5D8 188 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 SETD9Q8NE22 299 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 OR52J3Q8NH60 311 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 RAD51AP1Q96B01 352 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 TBC1D20Q96BZ9 403 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 WDR34Q96EX3 536 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 ATP6V1HQ9UI12 483 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 KCNK6Q9Y257 313 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 SLC17A4Q9Y2C5 497 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 CA5BQ9Y2D0 317 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 TRIOO75962 3097 aa13.22□□□□□ -0.29
PTCHD3-201ENST00000438700 SCAMP1O15126 338 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 IL3P08700 152 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 SPNP16150 400 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 CLDN2P57739 230 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 IFITM2Q01629 132 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 TOP3AQ13472 1001 aaPredicted RBP13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 NPTX1Q15818 432 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 TMIGD1Q6UXZ0 262 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 Q6ZS52 159 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 VN1R5Q7Z5H4 357 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 RNF130Q86XS8 419 aa13.21□□□□□ -0.29
PTCHD3-201ENST00000438700 NFKBIDQ8NI38 313 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms