RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SCUBE1Q8IWY4 988 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 ZBED8Q8IZ13 594 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 ZFP62Q8NB50 900 aaPredicted RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 APCDD1LQ8NCL9 501 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 FBXO36Q8NEA4 188 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 SRFBP1Q8NEF9 429 aaKnown RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 C7orf57Q8NEG2 295 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 NFAM1Q8NET5 270 aaPredicted RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 OR5L2Q8NGL0 311 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 OR14A16Q8NHC5 309 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 SREK1Q8WXA9 508 aaKnown RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 EXT2Q93063 718 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 MS4A6EQ96DS6 147 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 KCNC2Q96PR1 638 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 DMRTA2Q96SC8 542 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 KRT12Q99456 494 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 OR8D2Q9GZM6 311 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 DERL2Q9GZP9 239 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 EHD1Q9H4M9 534 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 EXO5Q9H790 373 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 POPDC3Q9HBV1 291 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 MCCC2Q9HCC0 563 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 TRMT1Q9NXH9 659 aaKnown RBP7.22□□□□□ -1.25
VPS50-204ENST00000438395 GPRC5BQ9NZH0 403 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 KCMF1Q9P0J7 381 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 HIVEP1P15822 2718 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 CELSR1Q9NYQ6 3014 aa7.22□□□□□ -1.25
VPS50-204ENST00000438395 LRIT2A6NDA9 550 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 EFCAB8A8MWE9 144 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 C19orf84I3L1E1 186 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 WWP2O00308 870 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 BCKDKO14874 412 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 CCNT2O60583 730 aaKnown RBP7.21□□□□□ -1.26
VPS50-204ENST00000438395 STK16O75716 305 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SEC31AO94979 1220 aaKnown RBP7.21□□□□□ -1.26
VPS50-204ENST00000438395 P04436 131 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 STMN1P16949 149 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 PPP2R1BP30154 601 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 GDF5P43026 501 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SSR2P43308 183 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 RAP1GDS1P52306 607 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 ATP6V0D1P61421 351 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 GNG11P61952 73 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 PLIN5Q00G26 463 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 POU4F1Q01851 419 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 IRF8Q02556 426 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 LAPTM5Q13571 262 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SERTAD2Q14140 314 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 TGFBIQ15582 683 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SWI5Q1ZZU3 235 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 XP32Q5T750 250 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 NDUFAF5Q5TEU4 345 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SULT1C3Q6IMI6 304 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 OPN5Q6U736 354 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 IL20RBQ6UXL0 311 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 RTL4Q6ZR62 310 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 FAM47EQ6ZV65 393 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 MDGA2Q7Z553 956 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 TMEM200AQ86VY9 491 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 MYLK4Q86YV6 388 aaPredicted RBP7.21□□□□□ -1.26
VPS50-204ENST00000438395 CLYBLQ8N0X4 340 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 ARMC10Q8N2F6 343 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 BBOF1Q8ND07 529 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 MORN4Q8NDC4 146 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 MYRIPQ8NFW9 859 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 OR2M7Q8NG81 312 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 OR10Q1Q8NGQ4 319 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 PYROXD1Q8WU10 500 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 UBE2E3Q969T4 207 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 RHBDF1Q96CC6 855 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 PTCD3Q96EY7 689 aaKnown RBP7.21□□□□□ -1.26
VPS50-204ENST00000438395 SGCZQ96LD1 299 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 PWWP2AQ96N64 755 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SMC6Q96SB8 1091 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 FAM173AQ9BQD7 235 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 ZNF559Q9BR84 538 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 DEFB127Q9H1M4 99 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 LDAHQ9H6V9 325 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS50-204ENST00000438395 MYOTQ9UBF9 498 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 RNF112Q9ULX5 631 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 ASB1Q9Y576 335 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 TEX264Q9Y6I9 313 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 SCN2AQ99250 2005 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 CACNA1CQ13936 2221 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 PDZD2O15018 2839 aa7.21□□□□□ -1.26
VPS50-204ENST00000438395 CTAGE15A4D2H0 777 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 OR14I1A6ND48 311 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 C17orf105B2RV13 164 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 C4orf51C9J302 202 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 FAM47E-STBD1D6RA91 191 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 NPIPA2E9PIF3 369 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 NPIPA3F8WFD2 350 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 G3V3Y1 287 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 CCDC188H7C350 402 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 J3QW42 95 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 ADAM10O14672 748 aa7.2□□□□□ -1.26
VPS50-204ENST00000438395 PHGDHO43175 533 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms