RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 AIG1Q9NVV5 245 aa12.7□□□□□ -0.38
EXT1-203ENST00000437196 C19orf25Q9UFG5 118 aaPredicted RBP12.7□□□□□ -0.38
EXT1-203ENST00000437196 GIMAP2Q9UG22 337 aa12.7□□□□□ -0.38
EXT1-203ENST00000437196 TCFL5Q9UL49 500 aa12.7□□□□□ -0.38
EXT1-203ENST00000437196 MKL2Q9ULH7 1088 aa12.7□□□□□ -0.38
EXT1-203ENST00000437196 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
EXT1-203ENST00000437196 PCDHA9Q9Y5H5 950 aa12.7□□□□□ -0.38
EXT1-203ENST00000437196 CCDC88CQ9P219 2028 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 NUP210LQ5VU65 1888 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 LOC101059948A0A1B0GTJ6 334 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 A0A1W2PR48 441 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 MED19A0JLT2 244 aaPredicted RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 E9PBE3 544 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 KLHL41O60662 606 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 B4GALT2O60909 372 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 AIFM1O95831 613 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 RECKO95980 971 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 FAM107AO95990 144 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 G6PDP11413 515 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 DRD4P21917 467 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 ALDH9A1P49189 494 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 CLNS1AP54105 237 aaKnown RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 EMP2P54851 167 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 MC1RQ01726 317 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 STX4Q12846 297 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 COL9A2Q14055 689 aaPredicted RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 SSPNQ14714 243 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 DPY19L1Q2PZI1 675 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 C18orf63Q68DL7 685 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 FAM71E1Q6IPT2 247 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 LCN10Q6JVE6 187 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 CGB2Q6NT52 195 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 GLB1L3Q8NCI6 653 aaPredicted RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 PLPP5Q8NEB5 264 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.69□□□□□ -0.38
EXT1-203ENST00000437196 ZNF764Q96H86 408 aaPredicted RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 IP6K3Q96PC2 410 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 TSSK3Q96PN8 268 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 CSF3RQ99062 836 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 ZBTB18Q99592 522 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 SPSB2Q99619 263 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 ELAC2Q9BQ52 826 aaKnown RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 PELOQ9BRX2 385 aaKnown RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 DPY30Q9C005 99 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 BRINP2Q9C0B6 783 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 REEP4Q9H6H4 257 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 LANCL2Q9NS86 450 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 TMEM45AQ9NWC5 275 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 TEX10Q9NXF1 929 aaPredicted RBP12.69□□□□□ -0.38
EXT1-203ENST00000437196 C3orf18Q9UK00 162 aa12.69□□□□□ -0.38
EXT1-203ENST00000437196 IDSB3KWA1 339 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 TERTO14746 1132 aaKnown RBP12.68□□□□□ -0.38
EXT1-203ENST00000437196 SNX3O60493 162 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 DNAJB6O75190 326 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 CDC123O75794 336 aaPredicted RBP12.68□□□□□ -0.38
EXT1-203ENST00000437196 KLF7O75840 302 aaPredicted RBP12.68□□□□□ -0.38
EXT1-203ENST00000437196 TACR1P25103 407 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 PIK3R1P27986 724 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 ATP4BP51164 291 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 DIO3P55073 304 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 CLDN8P56748 225 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 C21orf58P58505 322 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 CLN3Q13286 438 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 PDCD4Q53EL6 469 aaKnown RBP12.68□□□□□ -0.38
EXT1-203ENST00000437196 GKAP1Q5VSY0 366 aaPredicted RBP12.68□□□□□ -0.38
EXT1-203ENST00000437196 SLC48A1Q6P1K1 146 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 UNQ6494/PRO21346Q6UXR6 183 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 RAB43Q86YS6 212 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 PRSS58Q8IYP2 241 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 MIER2Q8N344 545 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 OR4K14Q8NGD5 310 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 PTCHD1Q96NR3 888 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 RBCK1Q9BYM8 510 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 ACTL8Q9H568 366 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 SOX17Q9H6I2 414 aaPredicted RBP12.68□□□□□ -0.38
EXT1-203ENST00000437196 TAS2R7Q9NYW3 318 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 ZIM2Q9NZV7 527 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 BAIAP2L1Q9UHR4 511 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 ZNF780BQ9Y6R6 833 aa12.68□□□□□ -0.38
EXT1-203ENST00000437196 FREM2Q5SZK8 3169 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 URB1O60287 2271 aaKnown RBP12.67□□□□□ -0.38
EXT1-203ENST00000437196 FAM227AF5H4B4 570 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 KLK10O43240 276 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 DYRK3O43781 588 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 TBX19O60806 448 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 ALOX12BO75342 701 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 CREG1O75629 220 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 GPR75O95800 540 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 ALDOCP09972 364 aaKnown RBP12.67□□□□□ -0.38
EXT1-203ENST00000437196 C8orf89P0DMQ9 161 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 COX7A2P14406 83 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 NCF2P19878 526 aaPredicted RBP12.67□□□□□ -0.38
EXT1-203ENST00000437196 MMP11P24347 488 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 MRPL19P49406 292 aaKnown RBP12.67□□□□□ -0.38
EXT1-203ENST00000437196 SRSF11Q05519 484 aaKnown RBP12.67□□□□□ -0.38
EXT1-203ENST00000437196 ERV3-1Q14264 604 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 PTGR1Q14914 329 aa12.67□□□□□ -0.38
EXT1-203ENST00000437196 TGIF1Q15583 401 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms