RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 MMP25Q9NPA2 562 aa17.69■□□□□ 0.42
RPUSD3-207ENST00000433555 PNO1Q9NRX1 252 aaKnown RBP17.69■□□□□ 0.42
RPUSD3-207ENST00000433555 SENP1Q9P0U3 644 aa17.69■□□□□ 0.42
RPUSD3-207ENST00000433555 PHF11Q9UIL8 331 aa17.69■□□□□ 0.42
RPUSD3-207ENST00000433555 ZNF223Q9UK11 482 aaPredicted RBP17.69■□□□□ 0.42
RPUSD3-207ENST00000433555 SHANK1Q9Y566 2161 aa17.69■□□□□ 0.42
RPUSD3-207ENST00000433555 A0A1W2PS29 197 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 GLOD5A6NK44 160 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CLDN4O14493 209 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 PROM1O43490 865 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 TRIM13O60858 407 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CTNSO60931 367 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 ERLIN1O75477 346 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 MYO1DO94832 1006 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 F10P00742 488 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 KLK1P06870 262 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CHRNGP07510 517 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 NR2F6P10588 404 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 SERPINB3P29508 390 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 ST13P50502 369 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CSTF3Q12996 717 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 RCN2Q14257 317 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CES4AQ5XG92 561 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CLEC6AQ6EIG7 209 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 CYP20A1Q6UW02 462 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 ZNF605Q86T29 641 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 MMP21Q8N119 569 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 C1orf52Q8N6N3 182 aaKnown RBP17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 M1APQ8TC57 530 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 ELP5Q8TE02 316 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 PKNOX2Q96KN3 472 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 ADAP2Q9NPF8 381 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 PLA2G3Q9NZ20 509 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 PTGDR2Q9Y5Y4 395 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 SPACA6W5XKT8 324 aa17.68■□□□□ 0.42
RPUSD3-207ENST00000433555 HSD3B1P14060 373 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 HSD3B2P26439 372 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 RAE1P78406 368 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 FOLH1Q04609 750 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 MPP2Q14168 576 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 DGAT2L6Q6ZPD8 337 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 CUZD1Q86UP6 607 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 HPS6Q86YV9 775 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 CRLF3Q8IUI8 442 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 APCDD1LQ8NCL9 501 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 APIPQ96GX9 242 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 RPF2Q9H7B2 306 aaKnown RBP17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 KCNK13Q9HB14 408 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 ADAM29Q9UKF5 820 aa17.67■□□□□ 0.42
RPUSD3-207ENST00000433555 TMEM233B4DJY2 109 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 KLHL41O60662 606 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 ULK1O75385 1050 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 ICAM2P13598 275 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 MLLT10P55197 1068 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 NAA20P61599 178 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 TLE1Q04724 770 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 ZNF33BQ06732 778 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 TERF2Q15554 542 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 PLEKHN1Q494U1 663 aaPredicted RBP17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 H3F3CQ6NXT2 135 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 Q6ZS92 163 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 BEST3Q8N1M1 668 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 ZNF321PQ8N8H1 164 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 CATSPER1Q8NEC5 780 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 B3GNT7Q8NFL0 401 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 PNPLA2Q96AD5 504 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 PGM2Q96G03 612 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 ALOXE3Q9BYJ1 711 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 EPS8L2Q9H6S3 715 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 MS4A12Q9NXJ0 267 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 VPS29Q9UBQ0 182 aa17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 PPIEQ9UNP9 301 aaKnown RBP17.66■□□□□ 0.42
RPUSD3-207ENST00000433555 BLACEA4D250 179 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 A8MUI8 341 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 PGRMC2O15173 223 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 CTIFO43310 598 aaKnown RBP17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 PRKNO60260 465 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 BPGMP07738 259 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 UQCRHP07919 91 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 BUD31P41223 144 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 GPR143P51810 404 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 STX4Q12846 297 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 ELAVL1Q15717 326 aaKnown RBP17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 CCNYL2Q5T2Q4 361 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 ZADH2Q8N4Q0 377 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 OR6Y1Q8NGX8 325 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 DOK4Q8TEW6 326 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 PTPMT1Q8WUK0 201 aaPredicted RBP17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 CHTF18Q8WVB6 975 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 TM9SF4Q92544 642 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 NCLNQ969V3 563 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 CNDP1Q96KN2 507 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 LMF1Q96S06 567 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 SSU72Q9NP77 194 aaKnown RBP17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 VTI1BQ9UEU0 232 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 B3GNT3Q9Y2A9 372 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 FIS1Q9Y3D6 152 aa17.65■□□□□ 0.42
RPUSD3-207ENST00000433555 TRBV11-1A0A0K0K1C0 115 aa17.64■□□□□ 0.41
RPUSD3-207ENST00000433555 SERTM1A2A2V5 107 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms