RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 A0A088AWK7 358 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 S100BP04271 92 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 ZNF10P21506 573 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 CPN2P22792 545 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 SSTR2P30874 369 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 GGT5P36269 586 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 RAB10P61026 200 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 SLAMF1Q13291 335 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 TERF2Q15554 542 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 KBTBD12Q3ZCT8 623 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 GXYLT1Q4G148 440 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 PRAMEF20Q5VT98 475 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 ARHGAP11AQ6P4F7 1023 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 FAM47EQ6ZV65 393 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 PDPRQ8NCN5 879 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 KCNC2Q96PR1 638 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 GPR22Q99680 433 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 MS4A8Q9BY19 250 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 CNOT10Q9H9A5 744 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 NSMCE4AQ9NXX6 385 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 TUBA8Q9NY65 449 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 VTI1BQ9UEU0 232 aa13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-205ENST00000431889 GLOD5A6NK44 160 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 CCDC188H7C350 402 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 C1QAP02745 245 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 GP5P40197 560 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 SSR2P43308 183 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 HIST2H2ACQ16777 129 aaPredicted RBP13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 UBAP2Q5T6F2 1119 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 HIST2H2AA3Q6FI13 130 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 CDH24Q86UP0 819 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 TCAIMQ8N3R3 496 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 ZNF721Q8TF20 911 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 RND1Q92730 232 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 CDKL2Q92772 493 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 DAZLQ92904 295 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 KIAA1191Q96A73 305 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 NXNL1Q96CM4 212 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 TSPAN17Q96FV3 270 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 MTERF1Q99551 399 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 CPNE1Q99829 537 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 CAPS2Q9BXY5 557 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
SMARCE1-205ENST00000431889 HIVEP1P15822 2718 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 A0A1W2PS29 197 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 TOXO94900 526 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 GBAP04062 536 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 SLC35E2BP0CK96 405 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 HIST1H1TP22492 207 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 PIK3CGP48736 1102 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 PLTPP55058 493 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 ATP6V0D1P61421 351 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 CALCOCO2Q13137 446 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 AP5B1Q2VPB7 878 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 MED27Q6P2C8 311 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 TMEM64Q6YI46 380 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 TEX9Q8N6V9 391 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 OR7G3Q8NG95 312 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 OR14A16Q8NHC5 309 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 KCTD4Q8WVF5 259 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 WDR34Q96EX3 536 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 UBXN10Q96LJ8 280 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 SMC6Q96SB8 1091 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 SPOCK3Q9BQ16 436 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 ERP44Q9BS26 406 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 EFCAB11Q9BUY7 163 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 EHD1Q9H4M9 534 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 LDAHQ9H6V9 325 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 EXO5Q9H790 373 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 FREM3P0C091 2139 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 NINQ8N4C6 2090 aa13.18□□□□□ -0.3
SMARCE1-205ENST00000431889 ACOT7O00154 380 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 RFPL3SP0C7P2 107 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 CNR1P21554 472 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 CHRNB4P30926 498 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 HNRNPH2P55795 449 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 WNT3P56703 355 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 FOLH1Q04609 750 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 TFF3Q07654 80 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 TGM3Q08188 693 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 PAGE2BQ5JRK9 111 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 LIX1LQ8IVB5 337 aa13.17□□□□□ -0.3
SMARCE1-205ENST00000431889 LILRB4Q8NHJ6 448 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms