RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 PCDH17O14917 1159 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 ATP8B1O43520 1251 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 RGS14O43566 566 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 PCDH7O60245 1069 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 JUNP05412 331 aaKnown RBP23.58■■□□□ 1.36
CPNE1-212ENST00000430570 PRPH2P23942 346 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 TIA1P31483 386 aaKnown RBP eCLIP23.58■■□□□ 1.362e-6■■■□□ 17.9
CPNE1-212ENST00000430570 RPL14P50914 215 aaKnown RBP23.58■■□□□ 1.36
CPNE1-212ENST00000430570 CCL11P51671 97 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 ID2Q02363 134 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 Q0VFX4 171 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 SFT2D3Q587I9 215 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 ATG16L1Q676U5 607 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 MMP21Q8N119 569 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 RAB3IL1Q8TBN0 382 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 THAP1Q9NVV9 213 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 C19orf25Q9UFG5 118 aaPredicted RBP23.58■■□□□ 1.36
CPNE1-212ENST00000430570 GIMAP2Q9UG22 337 aa23.58■■□□□ 1.36
CPNE1-212ENST00000430570 PGRMC2O15173 223 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 SEC24DO94855 1032 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-212ENST00000430570 SNUPNO95149 360 aaKnown RBP23.57■■□□□ 1.36
CPNE1-212ENST00000430570 HPP00738 406 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 NR1D1P20393 614 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 PPP2R1BP30154 601 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 TLX1P31314 330 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-212ENST00000430570 BUD31P41223 144 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-212ENST00000430570 RRADP55042 308 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 OR4D2P58180 307 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 XKR7Q5GH72 579 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 GALNT18Q6P9A2 607 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 PARP9Q8IXQ6 854 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 IMMP1LQ96LU5 166 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 LRTM1Q9HBL6 345 aa23.57■■□□□ 1.36
CPNE1-212ENST00000430570 INTS9Q9NV88 658 aaKnown RBP23.57■■□□□ 1.36
CPNE1-212ENST00000430570 POLR3HQ9Y535 204 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-212ENST00000430570 NSG1A0A0A6YYJ2 146 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 A8MUA0 341 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 FGF17O60258 216 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 SEC22BO75396 215 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 NR2F6P10588 404 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 POLE2P56282 527 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 OCRLQ01968 901 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 NR6A1Q15406 480 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 PDCD2Q16342 344 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-212ENST00000430570 NDUFAF5Q5TEU4 345 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 HOMEZQ8IX15 550 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 VPS50Q96JG6 964 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 ALOXE3Q9BYJ1 711 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 ATP13A2Q9NQ11 1180 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 C1orf109Q9NX04 203 aa23.56■■□□□ 1.36
CPNE1-212ENST00000430570 ATP6AP2A0A1C7CYW4 349 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 BLACEA4D250 179 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 A6NL46 340 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 KLF11O14901 512 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 LSM1O15116 133 aaKnown RBP23.55■■□□□ 1.36
CPNE1-212ENST00000430570 ATP6AP2O75787 350 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 CELA2AP08217 269 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 FAM87AP0C7U9 286 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 TRA2BP62995 288 aaKnown RBP23.55■■□□□ 1.36
CPNE1-212ENST00000430570 ACTN3Q08043 901 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-212ENST00000430570 RFTN2Q52LD8 501 aaPredicted RBP23.55■■□□□ 1.36
CPNE1-212ENST00000430570 PAPD4Q6PIY7 484 aaKnown RBP23.55■■□□□ 1.36
CPNE1-212ENST00000430570 EXD3Q8N9H8 876 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 DNAJB14Q8TBM8 379 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 C16orf78Q8WTQ4 265 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 TANKQ92844 425 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 PPP1R36Q96LQ0 422 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 ARHGAP9Q9BRR9 750 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 PCDHA9Q9Y5H5 950 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 CACNA1GO43497 2377 aa23.55■■□□□ 1.36
CPNE1-212ENST00000430570 GNG14A0A1W2PPG7 69 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 ANXA4P09525 319 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-212ENST00000430570 TAS2R50P59544 299 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 FOLH1Q04609 750 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 STX4Q12846 297 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 AIMP2Q13155 320 aaKnown RBP23.54■■□□□ 1.36
CPNE1-212ENST00000430570 GALNTL6Q49A17 601 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 NOXRED1Q6NXP6 359 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 CLEC1AQ8NC01 280 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 TUBB6Q9BUF5 446 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 WDR41Q9HAD4 459 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 PNO1Q9NRX1 252 aaKnown RBP23.54■■□□□ 1.36
CPNE1-212ENST00000430570 RIC8BQ9NVN3 520 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 HEY2Q9UBP5 337 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 DLGAP4Q9Y2H0 992 aa23.54■■□□□ 1.36
CPNE1-212ENST00000430570 ERVH48-1M5A8F1 160 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 GUCY1B2O75343 617 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 IL3P08700 152 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 IGLV3-21P80748 117 aaPredicted RBP23.53■■□□□ 1.36
CPNE1-212ENST00000430570 RAPSNQ13702 412 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 FDCSPQ8NFU4 85 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 FAM76AQ8TAV0 307 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 DYDC1Q8WWB3 177 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 C19orf60Q96EN9 201 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 METTL2AQ96IZ6 378 aaKnown RBP23.53■■□□□ 1.36
CPNE1-212ENST00000430570 FCRL1Q96LA6 429 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 LPAR4Q99677 370 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 C5AR2Q9P296 337 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 CES1P1Q9UKY3 287 aa23.53■■□□□ 1.36
CPNE1-212ENST00000430570 A0A1W2PS29 197 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms