RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 HSD17B13Q7Z5P4 300 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 ABI3BPQ7Z7G0 1075 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 SEPT5Q99719 369 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 ZNF451Q9Y4E5 1061 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ADGRG4Q8IZF6 3080 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TNFRSF21O75509 655 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ATP12AP54707 1039 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 GTF2H3Q13889 308 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ZNF267Q14586 743 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 MPEG1Q2M385 716 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 MARCH8Q5T0T0 291 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ARMC12Q5T9G4 340 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 LRRC28Q86X40 367 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 SLC44A2Q8IWA5 706 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 SYNPOQ8N3V7 929 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 OR11H7Q8NGC8 314 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NPLOC4Q8TAT6 608 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CCDC120Q96HB5 630 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 GPR21Q99679 349 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NIPSNAP1Q9BPW8 284 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NUDT4Q9NZJ9 180 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PURGQ9UJV8 347 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 PQLC2LA1A4F0 135 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 MBLAC1A4D2B0 266 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 PRAMEF4O60810 478 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TSPAN19P0C672 248 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PEPDP12955 493 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 RPS3P23396 243 aaKnown RBP eCLIP4.91□□□□□ -1.62
RIF1-203ENST00000428287 FZD5Q13467 585 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TP53BP2Q13625 1128 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NOMO2Q5JPE7 1267 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PRAMEF9Q5VWM5 478 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 FAM109BQ6ICB4 259 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 STK40Q8N2I9 435 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TMEM86AQ8N2M4 240 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 RBPMSQ93062 196 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 PMEPA1Q969W9 287 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ORAI1Q96D31 301 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 KCTD7Q96MP8 289 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 FUZQ9BT04 418 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ABHD16BQ9H3Z7 469 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 IMP3Q9NV31 184 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 FAM8A1Q9UBU6 413 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 USP21Q9UK80 565 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 OGDHLQ9ULD0 1010 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PCDHB11Q9Y5F2 797 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PIPSLA2A3N6 862 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 HAS3O00219 553 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 GPR171O14626 319 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PRKYO43930 277 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 SELENOFO60613 162 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NIPSNAP2O75323 286 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PAGE1O75459 146 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 GLUD1P00367 558 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 LIMS3P0CW19 117 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 LIMS4P0CW20 117 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CNR2P34972 360 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TAF6P49848 677 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CNIH2Q6PI25 160 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 L3MBTL4Q8NA19 623 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 OR10Q1Q8NGQ4 319 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CSGALNACT1Q8TDX6 532 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 FAM162AQ96A26 154 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CELF6Q96J87 481 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 PKMYT1Q99640 499 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 MAPKAP1Q9BPZ7 522 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 BBS2Q9BXC9 721 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 POMT2Q9UKY4 750 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 DSCAMO60469 2012 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 HEPACAM2A8MVW5 462 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CLDN5O00501 218 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 RHOQP17081 205 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 RHCEP18577 417 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CASP2P42575 452 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 CDKN2CP42773 168 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 DCDP81605 110 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 C2orf80Q0P641 193 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 FAM98CQ17RN3 349 aaKnown RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 EOGTQ5NDL2 527 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 RGS7BPQ6MZT1 257 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 Q6ZPB1 254 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 UBASH3BQ8TF42 649 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 TRAPPC12Q8WVT3 735 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 HSD17B8Q92506 261 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 INPP5KQ9BT40 448 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 ABCG5Q9H222 651 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 RDH8Q9NYR8 311 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.91□□□□□ -1.62
RIF1-203ENST00000428287 LRP4O75096 1905 aa4.91□□□□□ -1.62
RIF1-203ENST00000428287 PTPRQQ9UMZ3 2332 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 MEIKINA0A087WXM9 373 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 GLYATL1P3A0A0U1RQE8 302 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 HMSDA8MTL9 139 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ITGA10O75578 1167 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 ZNF682O95780 498 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 PRLP01236 227 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 F11P03951 625 aa4.9□□□□□ -1.62
RIF1-203ENST00000428287 FABP3P05413 133 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms