RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 THEGLP0DJG4 465 aa11.88□□□□□ -0.51
CLCN4-203ENST00000421085 ABRAXAS2Q15018 415 aa11.88□□□□□ -0.51
CLCN4-203ENST00000421085 CDK10Q15131 360 aa11.88□□□□□ -0.51
CLCN4-203ENST00000421085 SUSD1Q6UWL2 747 aa11.88□□□□□ -0.51
CLCN4-203ENST00000421085 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
CLCN4-203ENST00000421085 C2orf15Q8WU43 125 aaKnown RBP11.88□□□□□ -0.51
CLCN4-203ENST00000421085 TMEM181Q9P2C4 612 aa11.88□□□□□ -0.51
CLCN4-203ENST00000421085 PCDHGA7Q9Y5G6 932 aa11.88□□□□□ -0.51
CLCN4-203ENST00000421085 COQ9O75208 318 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 BEST1O76090 585 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 HSD17B1P14061 328 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 RAB8AP61006 207 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ERVK-21P61565 698 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZNF33AQ06730 810 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZFAND4Q86XD8 727 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 GDPD1Q8N9F7 314 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SLC22A18Q96BI1 424 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SLC38A3Q99624 504 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 NRP1O14786 923 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 INPPL1O15357 1258 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 LYRM1O43325 122 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 TLL1O43897 1013 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 AOC2O75106 756 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 CLCNKAP51800 687 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 WDR45BQ5MNZ6 344 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 TMPRSS12Q86WS5 348 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZDHHC1Q8WTX9 485 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SH3YL1Q96HL8 342 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-203ENST00000421085 BCL7BQ9BQE9 202 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SMOC2Q9H3U7 446 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SERINC1Q9NRX5 453 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 GRID2O43424 1007 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SELPP16109 830 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 CAPN3P20807 821 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 NAA10P41227 235 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-203ENST00000421085 MEF2AQ02078 507 aaPredicted RBP11.87□□□□□ -0.51
CLCN4-203ENST00000421085 BEND4Q6ZU67 534 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 THRSPQ92748 146 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ABCG4Q9H172 646 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 C1orf196B1AJZ1 125 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 NME4O00746 187 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 CAPN15O75808 1086 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 LCKP06239 509 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 DRD5P21918 477 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZFP90Q8TF47 636 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 LRRC15Q8TF66 581 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 NPY6RQ99463 290 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 POTEKPQ9BYX7 375 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 RHPN2P1A8MT19 583 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 F8W036 122 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ADH6P28332 368 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 HOXC12P31275 282 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 PYCR1P32322 319 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 CA5AP35218 305 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 KCNQ1P51787 676 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 PRKXP51817 358 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 BLOC1S1P78537 153 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ZC3H3Q8IXZ2 948 aaKnown RBP11.87□□□□□ -0.51
CLCN4-203ENST00000421085 RHEBL1Q8TAI7 183 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 FEVQ99581 238 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 SLC29A1Q99808 456 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN4-203ENST00000421085 ENPP5Q9UJA9 477 aa11.87□□□□□ -0.51
CLCN4-203ENST00000421085 HMX3A6NHT5 357 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 EEF1E1-BLOC1S5C9J1V9 151 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 HNRNPFP52597 415 aaKnown RBP11.86□□□□□ -0.51
CLCN4-203ENST00000421085 NIPAL4Q0D2K0 466 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 HYAL2Q12891 473 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 SLC16A9Q7RTY1 509 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 HMGN2P46Q86SG4 172 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 OVCA2Q8WZ82 227 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 SMPDL3AQ92484 453 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 TREX2Q9BQ50 279 aaPredicted RBP11.86□□□□□ -0.51
CLCN4-203ENST00000421085 TXLNGYQ9BZA5 131 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 Q9N2J8 555 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 H7C417 338 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 ZNF701M0R085 212 aaPredicted RBP11.86□□□□□ -0.51
CLCN4-203ENST00000421085 GOSR2O14653 212 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 RHCEP18577 417 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 RPL10P27635 214 aaKnown RBP11.86□□□□□ -0.51
CLCN4-203ENST00000421085 GAS6Q14393 721 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 GNMTQ14749 295 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 OR6Q1Q8NGQ2 317 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 OR56A3Q8NH54 315 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 BBS10Q8TAM1 723 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 PHOSPHO1Q8TCT1 267 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 MYNNQ9NPC7 610 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 ACSL6Q9UKU0 697 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 TRBV2A0A0J9YWF9 115 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 UPK3BL1B0FP48 263 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 UPK3BL2E5RIL1 263 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 KDELR3O43731 214 aa11.86□□□□□ -0.51
CLCN4-203ENST00000421085 POP7O75817 140 aaKnown RBP11.86□□□□□ -0.51
CLCN4-203ENST00000421085 MS4A13Q5J8X5 152 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms