RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
RPS28-201ENST00000417088 KCNF1Q9H3M0 494 aa13.72□□□□□ -0.21
RPS28-201ENST00000417088 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
RPS28-201ENST00000417088 CD274Q9NZQ7 290 aa13.72□□□□□ -0.21
RPS28-201ENST00000417088 PHF3Q92576 2039 aaKnown RBP13.72□□□□□ -0.21
RPS28-201ENST00000417088 ZFHX3Q15911 3703 aa13.72□□□□□ -0.21
RPS28-201ENST00000417088 A0A1B0GVC2 190 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 OR14I1A6ND48 311 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 CCDC188H7C350 402 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 RTCAO00442 366 aaKnown RBP13.71□□□□□ -0.21
RPS28-201ENST00000417088 BCKDKO14874 412 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.21
RPS28-201ENST00000417088 ETHE1O95571 254 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 HOXD4P09016 255 aaPredicted RBP13.71□□□□□ -0.21
RPS28-201ENST00000417088 ACVR2AP27037 513 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 CASP2P42575 452 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 MSH2P43246 934 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 CHIT1Q13231 466 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 E2F2Q14209 437 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 TBCCQ15814 346 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 HIST2H2ACQ16777 129 aaPredicted RBP13.71□□□□□ -0.21
RPS28-201ENST00000417088 HIST2H2AA3Q6FI13 130 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 OPN5Q6U736 354 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 TRILQ7L0X0 811 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 FAM109AQ8N4B1 249 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 GOLM1Q8NBJ4 401 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 PDPRQ8NCN5 879 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 SRFBP1Q8NEF9 429 aaKnown RBP13.71□□□□□ -0.21
RPS28-201ENST00000417088 OR5L2Q8NGL0 311 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 ZNF721Q8TF20 911 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 ZNF473Q8WTR7 871 aaKnown RBP13.71□□□□□ -0.21
RPS28-201ENST00000417088 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 SGCZQ96LD1 299 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 GPR22Q99680 433 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 MS4A8Q9BY19 250 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 TNFRSF10DQ9UBN6 386 aa13.71□□□□□ -0.21
RPS28-201ENST00000417088 EML6Q6ZMW3 1958 aa13.71□□□□□ -0.22
RPS28-201ENST00000417088 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 SCELO95171 688 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 TGFB1P01137 390 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 CELA3AP09093 270 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 CCL3P10147 92 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 STMN1P16949 149 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 HIST1H1TP22492 207 aaPredicted RBP13.7□□□□□ -0.22
RPS28-201ENST00000417088 GMPRP36959 345 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 MAGEA5P43359 124 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 DNASE1L1P49184 302 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 GNG11P61952 73 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 MRPS25P82663 173 aaKnown RBP13.7□□□□□ -0.22
RPS28-201ENST00000417088 ZKSCAN8Q15776 578 aaPredicted RBP13.7□□□□□ -0.22
RPS28-201ENST00000417088 HYAL4Q2M3T9 481 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 TMEM35AQ53FP2 167 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 PIGGQ5H8A4 983 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 ZNF585AQ6P3V2 769 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 LRRC70Q7Z2Q7 622 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 OR4N5Q8IXE1 308 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 CDKL2Q92772 493 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 UBXN10Q96LJ8 280 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 KRT12Q99456 494 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 RBBP8Q99708 897 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 CPNE1Q99829 537 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 CD244Q9BZW8 370 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 SEMA4BQ9NPR2 832 aaPredicted RBP13.7□□□□□ -0.22
RPS28-201ENST00000417088 SACM1LQ9NTJ5 587 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 TUBA8Q9NY65 449 aaPredicted RBP13.7□□□□□ -0.22
RPS28-201ENST00000417088 TXNDC16Q9P2K2 825 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 FAM215AQ9Y5M1 114 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 SAR1BQ9Y6B6 198 aa13.7□□□□□ -0.22
RPS28-201ENST00000417088 ATP6AP2A0A1C7CYW4 349 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 FAM159BA6NKW6 160 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 FIGNL2A6NMB9 653 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 AQP7O14520 342 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 FGF17O60258 216 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 KLK8O60259 260 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 ATP6AP2O75787 350 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 C1QAP02745 245 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 P04436 131 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 GLI4P10075 376 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 CPN2P22792 545 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 GP5P40197 560 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 STT3AP46977 705 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 IGLV3-21P80748 117 aaPredicted RBP13.69□□□□□ -0.22
RPS28-201ENST00000417088 ASPHQ12797 758 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 MPEG1Q2M385 716 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 AP5B1Q2VPB7 878 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
RPS28-201ENST00000417088 RTL6Q6ICC9 239 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 B3GNT6Q6ZMB0 384 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 CYS1Q717R9 158 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 LAS2Q8IYD9 372 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 BBOF1Q8ND07 529 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 OR10Q1Q8NGQ4 319 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 EXT2Q93063 718 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 SENP5Q96HI0 755 aaPredicted RBP13.69□□□□□ -0.22
RPS28-201ENST00000417088 NAPGQ99747 312 aaPredicted RBP13.69□□□□□ -0.22
RPS28-201ENST00000417088 ZNF559Q9BR84 538 aa13.69□□□□□ -0.22
RPS28-201ENST00000417088 PHACTR1Q9C0D0 580 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms