RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 GDF15Q99988 308 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 CCDC32Q9BV29 185 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 ASAH2Q9NR71 780 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 DOCK6Q96HP0 2047 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 A0A0G2JN53 185 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 GREM1O60565 184 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 IMPA1P29218 277 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 TIA1P31483 386 aaKnown RBP eCLIP13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 ALDH9A1P49189 494 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 PTPN5P54829 565 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 MAP4K2Q12851 820 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 EFR3AQ14156 821 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 SAXO2Q658L1 398 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 RETSATQ6NUM9 610 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 GPR32P1Q8NGA4 272 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 CHTF18Q8WVB6 975 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 C1GALT1C1Q96EU7 318 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 C2orf49Q9BVC5 232 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 REV1Q9UBZ9 1251 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 PLEKHB1Q9UF11 243 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 BTNL2Q9UIR0 455 aa13.9□□□□□ -0.18
SEMA3F-202ENST00000413852 MN1Q10571 1320 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 HMX3A6NHT5 357 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SEPT4O43236 478 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SH3BP5O60239 455 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 PSMA1P25786 263 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 EIF4HQ15056 248 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SPDYE7PQ495Y7 208 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 PDZK1Q5T2W1 519 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 DNAJB7Q7Z6W7 309 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 OR2AP1Q8NGE2 309 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SNAPC3Q92966 411 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SCRN2Q96FV2 425 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 IL17FQ96PD4 163 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 GPA33Q99795 319 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 CXorf36Q9H7Y0 433 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 NLKQ9UBE8 527 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 PCDHGB2Q9Y5G2 931 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 ENPP4Q9Y6X5 453 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 ANKDD1BA6NHY2 528 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 FADS2P1A8MWK0 482 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 INPPL1O15357 1258 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 IL3P08700 152 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SPINT3P49223 89 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 HNMTP50135 292 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 EEF1A2Q05639 463 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 RUNX1T1Q06455 604 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 TARDBPQ13148 414 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SLBPQ14493 270 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 VN1R5Q7Z5H4 357 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 HORMAD2Q8N7B1 307 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 FAM46DQ8NEK8 389 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 RIOK2Q9BVS4 552 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 SUV39H2Q9H5I1 410 aa13.89□□□□□ -0.19
SEMA3F-202ENST00000413852 LOC102723532A0A0G2JNH3 316 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 M0R3H8 397 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 UGT2B17O75795 530 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 IGSF6O95976 241 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CBSLP0DN79 551 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 PAX3P23760 479 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CBSP35520 551 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 LIMS1P48059 325 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 GPNMBQ14956 572 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ZNF770Q6IQ21 691 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 MSANTD1Q6ZTZ1 278 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 FAM9CQ8IZT9 166 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 TM9SF4Q92544 642 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 PPCDCQ96CD2 204 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC25A19Q9HC21 320 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 MOSPD1Q9UJG1 213 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 LRFN2Q9ULH4 789 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ITM2BQ9Y287 266 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 YIPF1Q9Y548 306 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 AGAP14A8MT82 685 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ALX3O95076 343 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ALPPL2P10696 532 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ITGA2P17301 1181 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CSTF2P33240 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 KRR1Q13601 381 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 LRRC32Q14392 662 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 TEAD4Q15561 434 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SYTL3Q4VX76 610 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 LIPJQ5W064 366 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 ACSM5Q6NUN0 579 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 CHCHD4Q8N4Q1 142 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 OR52N2Q8NGI0 321 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 OR52P1PQ8NH57 321 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 GEMIN6Q8WXD5 167 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 TMEM80Q96HE8 168 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 NELL2Q99435 816 aa13.88□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC6A16Q9GZN6 736 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms