RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 KIAA1614Q5VZ46 1190 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ZCCHC8Q6NZY4 707 aaKnown RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 SHQ1Q6PI26 577 aaKnown RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 NXPE4Q6UWF7 544 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ENPP6Q6UWR7 440 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 TMPRSS11BQ86T26 416 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 AMZ2Q86W34 360 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 DCUN1D3Q8IWE4 304 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 SLC22A18ASQ8N1D0 253 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 C1orf52Q8N6N3 182 aaKnown RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 METTL25Q8N6Q8 603 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ARL10Q8N8L6 244 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 HUS1BQ8NHY5 278 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 C11orf24Q96F05 449 aaPredicted RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 MTERF1Q99551 399 aaKnown RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 INPP5KQ9BT40 448 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 GABARAPL1Q9H0R8 117 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 REEP4Q9H6H4 257 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 PELI2Q9HAT8 420 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 IL1RAPQ9NPH3 570 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 SPATA7Q9P0W8 599 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 FAM8A1Q9UBU6 413 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 IL17BQ9UHF5 180 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 CEPT1Q9Y6K0 416 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 YKT6O15498 198 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 MRPS14O60783 128 aaKnown RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PRAMEF4O60810 478 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 TRMUO75648 421 aaKnown RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 SEC24DO94855 1032 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 KRT75O95678 551 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 FABP3P05413 133 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 MYCLP1P12525 358 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 NPPBP16860 134 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 EPHA8P29322 1005 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PTPN6P29350 595 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 DNAJA1P31689 397 aaKnown RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 NXPH1P58417 271 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 TBPL1P62380 186 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 GABREP78334 506 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 DAB2P98082 770 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 NFATC3Q12968 1075 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 FADDQ13158 208 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 NFATC4Q14934 902 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 TPRG1LQ5T0D9 272 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PRAMEF9Q5VWM5 478 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 OR2T5Q6IEZ7 315 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF773Q6PK81 442 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 CBLL1Q75N03 491 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PAGE2Q7Z2X7 111 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PIWIL3Q7Z3Z3 882 aaKnown RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 LRRTM4Q86VH4 590 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PHACTR4Q8IZ21 702 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 OR7A2PQ8NGA2 310 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 OR2T29Q8NH02 315 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 GOT1L1Q8NHS2 421 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 FAM110BQ8TC76 370 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 LZICQ8WZA0 190 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 TTC9Q92623 222 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 EBPLQ9BY08 206 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 NT5DC2Q9H857 520 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 TPT1P8Q9HAU6 139 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 MYNNQ9NPC7 610 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 GPR27Q9NS67 375 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 FAM118AQ9NWS6 357 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 ATXN10Q9UBB4 475 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 ACSL5Q9ULC5 683 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PCDHGB5Q9Y5G0 923 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 PTPN13Q12923 2485 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 ATMQ13315 3056 aa12.29□□□□□ -0.44
SMARCB1-203ENST00000407082 COL5A1P20908 1838 aaPredicted RBP12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 TMEM202A6NGA9 273 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 GABRR3A8MPY1 467 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PLOD2O00469 737 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 KMOO15229 486 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SLC16A6O15403 523 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SCN2BO60939 215 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SDC3O75056 442 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 OR6B1O95007 311 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 SEMA3DO95025 777 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF682O95780 498 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 GSNP06396 782 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ITGAMP11215 1152 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 JUNBP17275 347 aaPredicted RBP12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ITGA2P17301 1181 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 CD22P20273 847 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 FPR1P21462 350 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 IDSP22304 550 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 EEF1B2P24534 225 aaKnown RBP12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 ACADLP28330 430 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PDHA2P29803 388 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 RYKP34925 604 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 PCGF2P35227 344 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 DCTP40126 519 aa12.28□□□□□ -0.44
SMARCB1-203ENST00000407082 WNT3P56703 355 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms