RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SNRNP40Q96DI7 357 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CCDC126Q96EE4 140 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 APOPT1Q96IL0 206 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 RPF2Q9H7B2 306 aaKnown RBP13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 OXSMQ9NWU1 459 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MAP10Q9P2G4 905 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TEKT2Q9UIF3 430 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SLC12A4Q9UP95 1085 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PLLPQ9Y342 182 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SPACA6W5XKT8 324 aa13.17□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MYO18BQ8IUG5 2567 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 A0A1W2PR48 441 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ARHGAP10A1A4S6 786 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SEMA3DO95025 777 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 KLK1P06870 262 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 FAM58BPP0C7Q3 252 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CHN1P15882 459 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TPP2P29144 1249 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 HTR6P50406 440 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TNFSF10P50591 281 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 FOXA1P55317 472 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TNFRSF17Q02223 184 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZNF844Q08AG5 666 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZNF169Q14929 603 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PCLAFQ15004 111 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TLR1Q15399 786 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 C10orf62Q5T681 223 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 OR1N1Q8NGS0 311 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 RDH11Q8TC12 318 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 AGAP11Q8TF27 550 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 THAP3Q8WTV1 239 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZNF354BQ96LW1 612 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 FAM111AQ96PZ2 611 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SHCBP1LQ9BZQ2 653 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 IQCGQ9H095 443 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CDCP1Q9H5V8 836 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MID1IP1Q9NPA3 183 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MS4A12Q9NXJ0 267 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ANKRD10Q9NXR5 420 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SLC17A7Q9P2U7 560 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 VTI1BQ9UEU0 232 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PHF11Q9UIL8 331 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ZNF223Q9UK11 482 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PCDHGA10Q9Y5H3 936 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ULK1O75385 1050 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ESRRBO95718 433 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 AIFM1O95831 613 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 KRT6AP02538 564 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 KRT6BP04259 564 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 HMOX2P30519 316 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 KRT6CP48668 564 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 GPR143P51810 404 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 DNAJB13P59910 316 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 FOLH1Q04609 750 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 GALNT1Q10472 559 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TBL3Q12788 808 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TERF2Q15554 542 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 KRT71Q3SY84 523 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 SCIMPQ6UWF3 145 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 FRMD7Q6ZUT3 714 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PTPMT1Q8WUK0 201 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 NCLNQ969V3 563 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TMEM109Q9BVC6 243 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TNFRSF12AQ9NP84 129 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 ASF1BQ9NVP2 202 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 LYARQ9NX58 379 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 MKS1Q9NXB0 559 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 TEX10Q9NXF1 929 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 NTNG1Q9Y2I2 539 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 CLCA3PQ9Y6N3 262 aa13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 UBR5O95071 2799 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB1-202ENST00000399079 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CPAMD8Q8IZJ3 1885 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TRBV11-1A0A0K0K1C0 115 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR5H15A6NDH6 313 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PGRMC2O15173 223 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TLX1P31314 330 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 BUD31P41223 144 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PKNOX1P55347 436 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TAS2R50P59544 299 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MEP1AQ16819 746 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CFAP157Q5JU67 520 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CCNYL2Q5T2Q4 361 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 LIPMQ5VYY2 423 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DGAT2L6Q6ZPD8 337 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF321PQ8N8H1 164 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms