RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SELENOFO60613 162 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 LYNP07948 512 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 PRKCIP41743 596 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 FOLH1Q04609 750 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 TOMM20Q15388 145 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 CDO1Q16878 200 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 SHEQ5VZ18 495 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 LIPJQ5W064 366 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 WDR25Q64LD2 544 aaPredicted RBP2.22□□□□□ -2.05
TRAV40-201ENST00000390467 IGFL2Q6UWQ7 119 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 CCDC186Q7Z3E2 898 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 SAMD12Q8N8I0 201 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 LINC01006Q8NI28 216 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF274Q96GC6 653 aaPredicted RBP2.22□□□□□ -2.05
TRAV40-201ENST00000390467 CDHR1Q96JP9 859 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 INPP5KQ9BT40 448 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 ZNF665Q9H7R5 613 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 PDRG1Q9NUG6 133 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 RNF24Q9Y225 148 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 NTNG1Q9Y2I2 539 aa2.22□□□□□ -2.05
TRAV40-201ENST00000390467 CFAP65Q6ZU64 1925 aaKnown RBP2.22□□□□□ -2.05
TRAV40-201ENST00000390467 TMEM129A0AVI4 362 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 DUSP11O75319 330 aaKnown RBP2.21□□□□□ -2.06
TRAV40-201ENST00000390467 P0C879 139 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 FKBP1BP68106 108 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 PAX2Q02962 417 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 CETN1Q12798 172 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 SLC17A1Q14916 467 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 C14orf28Q4W4Y0 310 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 LYPLAL1Q5VWZ2 237 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 PM20D1Q6GTS8 502 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 FBXO16Q8IX29 292 aaPredicted RBP2.21□□□□□ -2.06
TRAV40-201ENST00000390467 LSMEM1Q8N8F7 131 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 ZNF671Q8TAW3 534 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 SEPT8Q92599 483 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 EXOC4Q96A65 974 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 BSCL2Q96G97 398 aaPredicted RBP2.21□□□□□ -2.06
TRAV40-201ENST00000390467 ERGIC2Q96RQ1 377 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 INTS14Q96SY0 518 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 TRIM7Q9C029 511 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 AMBNQ9NP70 447 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 ZNF319Q9P2F9 582 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 GMEB2Q9UKD1 530 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 ETV7Q9Y603 341 aa2.21□□□□□ -2.06
TRAV40-201ENST00000390467 PFASO15067 1338 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 IGHV3-35A0A0C4DH35 117 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 TSPY2A6NKD2 308 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 ZNF32P17041 273 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 RPL27P61353 136 aaKnown RBP2.2□□□□□ -2.06
TRAV40-201ENST00000390467 CKAP4Q07065 602 aaKnown RBP2.2□□□□□ -2.06
TRAV40-201ENST00000390467 ISXQ2M1V0 245 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 IGFL3Q6UXB1 125 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 ADGRD2Q7Z7M1 963 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 TIGD4Q8IY51 512 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 RNF149Q8NC42 400 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 BEST4Q8NFU0 473 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 OR1K1Q8NGR3 316 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 TBCKQ8TEA7 893 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 NAP1L5Q96NT1 182 aaPredicted RBP2.2□□□□□ -2.06
TRAV40-201ENST00000390467 SDHCQ99643 169 aaPredicted RBP2.2□□□□□ -2.06
TRAV40-201ENST00000390467 UBA5Q9GZZ9 404 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 TNMDQ9H2S6 317 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 IKZF5Q9H5V7 419 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 VIPAS39Q9H9C1 493 aa2.2□□□□□ -2.06
TRAV40-201ENST00000390467 MRPL17Q9NRX2 175 aaKnown RBP2.2□□□□□ -2.06
TRAV40-201ENST00000390467 CCT8L1PA6NM43 557 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 CSO75390 466 aaKnown RBP2.19□□□□□ -2.06
TRAV40-201ENST00000390467 CLN5O75503 358 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 LYPD3O95274 346 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 CENPBP07199 599 aaPredicted RBP2.19□□□□□ -2.06
TRAV40-201ENST00000390467 HOXC4P09017 264 aaPredicted RBP2.19□□□□□ -2.06
TRAV40-201ENST00000390467 ODC1P11926 461 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 PTMSP20962 102 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 PPP2R1AP30153 589 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 ZNF41P51814 821 aaPredicted RBP2.19□□□□□ -2.06
TRAV40-201ENST00000390467 SLC25A1P53007 311 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 RIPK4P57078 832 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 ERVPABLB-1P60509 514 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 PPP1R3AQ16821 1122 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 C1orf141Q5JVX7 400 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 SPOUT1Q5T280 376 aaKnown RBP2.19□□□□□ -2.06
TRAV40-201ENST00000390467 SPATA21Q7Z572 469 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 PHLDB2Q86SQ0 1253 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 ANKRD46Q86W74 232 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 CCDC191Q8NCU4 936 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 CCT8L2Q96SF2 557 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 TTYH2Q9BSA4 534 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 OR10A4Q9H209 315 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 MINDY3Q9H8M7 445 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 NKIRAS2Q9NYR9 191 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 ADAM22Q9P0K1 906 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 MLXQ9UH92 298 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 ABCG2Q9UNQ0 655 aa2.19□□□□□ -2.06
TRAV40-201ENST00000390467 KAT6BQ8WYB5 2073 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 ILVBLA1L0T0 632 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 GTPBP10A4D1E9 387 aaKnown RBP2.18□□□□□ -2.06
TRAV40-201ENST00000390467 HTR3EA5X5Y0 456 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 EPOPA6NHQ4 379 aa2.18□□□□□ -2.06
TRAV40-201ENST00000390467 PANO1I0J062 215 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms