RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 GIPC3Q8TF64 312 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 C2orf15Q8WU43 125 aaKnown RBP3.57□□□□□ -1.84
SMC6-202ENST00000381272 NELL1Q92832 810 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 NCLNQ969V3 563 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 ULK4Q96C45 1275 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 RHBDF1Q96CC6 855 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 FBXL8Q96CD0 374 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 PDLIM5Q96HC4 596 aaKnown RBP3.57□□□□□ -1.84
SMC6-202ENST00000381272 ITCHQ96J02 903 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 CSF3RQ99062 836 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 DOK1Q99704 481 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 BARD1Q99728 777 aaKnown RBP3.57□□□□□ -1.84
SMC6-202ENST00000381272 CLSTN3Q9BQT9 956 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 INPP5KQ9BT40 448 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 OSBPL10Q9BXB5 764 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 VN1R3Q9BXE9 311 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 DGCR6LQ9BY27 220 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 UGT2B28Q9BY64 529 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 YTHDF1Q9BYJ9 559 aaKnown RBP3.57□□□□□ -1.84
SMC6-202ENST00000381272 LRTM1Q9HBL6 345 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 MAGEE1Q9HCI5 957 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 IL26Q9NPH9 171 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 HPS4Q9NQG7 708 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 STARD7Q9NQZ5 370 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 C8orf4Q9NR00 106 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 FAM118AQ9NWS6 357 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 DNAJB9Q9UBS3 223 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 AASSQ9UDR5 926 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 CIDEBQ9UHD4 219 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 CRLS1Q9UJA2 301 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 GNPTGQ9UJJ9 305 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 CDH7Q9ULB5 785 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 CLEC4EQ9ULY5 219 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 SLC45A2Q9UMX9 530 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 DLGAP4Q9Y2H0 992 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 OR51B4Q9Y5P0 310 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 U3KQV3 271 aa3.57□□□□□ -1.84
SMC6-202ENST00000381272 GLYATL1P3A0A0U1RQE8 302 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 A0A1W2PQ67 120 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SH3PXD2BA1X283 911 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 DYTNA2CJ06 578 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZNF701M0R085 212 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 F2RL2O00254 374 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 YY2O15391 372 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 E2F6O75461 281 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CREG1O75629 220 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SEC14L2O76054 403 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 DIRAS1O95057 198 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SCELO95171 688 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ZBTB11O95625 1053 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 CPNE6O95741 557 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TRBC1P01850 177 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 IL6P05231 212 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 HNRNPCP07910 306 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMC6-202ENST00000381272 HTR1AP08908 422 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 FTH1P19P0C7X4 201 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 EBLN1P0CF75 366 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 BCKDHAP12694 445 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 EPORP19235 508 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCNA2P20248 432 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 MSH3P20585 1137 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ITGALP20701 1170 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 EFNA1P20827 205 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 RPS3P23396 243 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMC6-202ENST00000381272 CRHBPP24387 322 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 S100A3P33764 101 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 NUP214P35658 2090 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 FOLR3P41439 243 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TM4SF4P48230 202 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ALDH7A1P49419 539 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 PSMD7P51665 324 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 MLLT10P55197 1068 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 ELLP55199 621 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 CCL23P55773 120 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 C21orf59P57076 290 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 RPS14P62263 151 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 POU6F2P78424 691 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 BCL2L1Q07817 233 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CD47Q08722 323 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SMARCB1Q12824 385 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GRSF1Q12849 480 aaKnown RBP eCLIP3.56□□□□□ -1.84
SMC6-202ENST00000381272 ELAVL2Q12926 359 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 MTA1Q13330 715 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SLC14A1Q13336 389 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 NFATC2Q13469 925 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 BFSP2Q13515 415 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 DYRK1AQ13627 763 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CDH18Q13634 790 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SPCS2Q15005 226 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CDKN3Q16667 212 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 CD300EQ496F6 205 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 INO80DQ53TQ3 878 aaPredicted RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 LRRC73Q5JTD7 316 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 RBM48Q5RL73 367 aaKnown RBP3.56□□□□□ -1.84
SMC6-202ENST00000381272 LDLRAP1Q5SW96 308 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 C6orf141Q5SZD1 244 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 GPRC6AQ5T6X5 926 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 TXNDC8Q6A555 127 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 LAIR2Q6ISS4 152 aa3.56□□□□□ -1.84
SMC6-202ENST00000381272 SLC8B1Q6J4K2 584 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms