RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 DOHHQ9BU89 302 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 IL21Q9HBE4 155 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 MGAT4AQ9UM21 535 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 SPATA2Q9UM82 520 aa13.24□□□□□ -0.29
SDC1-202ENST00000381150 FCF1Q9Y324 198 aaKnown RBP13.24□□□□□ -0.29
SDC1-202ENST00000381150 FADS2P1A8MWK0 482 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 INMT-MINDY4F8WBC2 141 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 K7ERQ8 282 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 TLX2O43763 284 aaPredicted RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 HPGDSO60760 199 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 LATS1O95835 1130 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ANXA8P13928 327 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 RPS5P46782 204 aaKnown RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 BNC1Q01954 994 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 IRF8Q02556 426 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 GLRX5Q86SX6 157 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 C11orf65Q8NCR3 313 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 GALNT11Q8NCW6 608 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ANKK1Q8NFD2 765 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 GATAD2BQ8WXI9 593 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 QRFPRQ96P65 431 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 RACGAP1Q9H0H5 632 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ZNF624Q9P2J8 865 aaPredicted RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 PLA2G10O15496 165 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CSO75390 466 aaKnown RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 SYPP08247 313 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 EBLN1P0CF75 366 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 MYL12AP19105 171 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 CHIT1Q13231 466 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 RAB33AQ14088 237 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CDKN3Q16667 212 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 LRRC73Q5JTD7 316 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 BCL2L15Q5TBC7 163 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ZNF852Q6ZMS4 543 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CHMP1BQ7LBR1 199 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ATCAYQ86WG3 371 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 SPATA9Q9BWV2 254 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ANKRA2Q9H9E1 313 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 PCDHGA2Q9Y5H1 932 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ZNF106Q9H2Y7 1883 aaKnown RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ATP6V1G2-DDX39BF2Z307 99 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 MTX2O75431 263 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 GASTP01350 101 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CHI3L1P36222 383 aaPredicted RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 ABATP80404 500 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 COX20Q5RI15 118 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CPTPQ5TA50 214 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 SERPINA11Q86U17 422 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ZBTB2Q8N680 514 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 VPS37AQ8NEZ2 397 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ZNF689Q96CS4 500 aaPredicted RBP13.23□□□□□ -0.29
SDC1-202ENST00000381150 C3orf14Q9HBI5 128 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 ASAH2Q9NR71 780 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 MAPRE3Q9UPY8 281 aa13.23□□□□□ -0.29
SDC1-202ENST00000381150 TLR4O00206 839 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 YY2O15391 372 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 FCER2P06734 321 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 PRKACAP17612 351 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 ALAS2P22557 587 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 CHMP24386 653 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 MAPK1P28482 360 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 CSKP41240 450 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 SUZ12Q15022 739 aaKnown RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 ATP13A5Q4VNC0 1218 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 LRIF1Q5T3J3 769 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 ADNP2Q6IQ32 1131 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 ERICH5Q6P6B1 374 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 DEF8Q6ZN54 512 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 UBE2R2Q712K3 238 aaPredicted RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 SLC39A11Q8N1S5 342 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 DENND6BQ8NEG7 585 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 ANGPTL6Q8NI99 470 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 C7orf34Q96L11 122 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 SIGLEC11Q96RL6 698 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 PAK6Q9NQU5 681 aaPredicted RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 NKIRAS2Q9NYR9 191 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 SNX11Q9Y5W9 270 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 SMAD6O43541 496 aaKnown RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 ZNF821O75541 412 aaPredicted RBP13.22□□□□□ -0.29
SDC1-202ENST00000381150 PRPS2P11908 318 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 ZNF81P51508 661 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 CTBP2P56545 445 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 NCF4Q15080 339 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 PLCZ1Q86YW0 608 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 TCEAL8Q8IYN2 117 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 APCDD1Q8J025 514 aa13.22□□□□□ -0.29
SDC1-202ENST00000381150 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms