RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GDI1P31150 447 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 RPL3P39023 403 aaKnown RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 CLCNKAP51800 687 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 CYP4F2P78329 520 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 RAPSNQ13702 412 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 FGL2Q14314 439 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 NPTX1Q15818 432 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.32□□□□□ -0.28
MSH5-202ENST00000375740 DMRTB1Q96MA1 342 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 RPP25Q9BUL9 199 aaKnown RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 PBX4Q9BYU1 374 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 ZBTB20Q9HC78 741 aaPredicted RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 ACSL6Q9UKU0 697 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 SAMHD1Q9Y3Z3 626 aaKnown RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 TRANK1O15050 2925 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 A0A1W2PRB8 838 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 EPOPA6NHQ4 379 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 ANKDD1BA6NHY2 528 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 TNFRSF21O75509 655 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 FADS2O95864 444 aaKnown RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 RPN2P04844 631 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 PSMB5P28074 263 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 SOX9P48436 509 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 SIM2Q14190 667 aaPredicted RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 ARHGAP19Q14CB8 494 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 CLCA4Q14CN2 919 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 IRF4Q15306 451 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 FAM214AQ32MH5 1076 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 PARM1Q6UWI2 310 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 DNAJC5GQ8N7S2 189 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 ANKRD53Q8N9V6 530 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 IL17RDQ8NFM7 739 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 OR6F1Q8NGZ6 308 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 OR5AK3PQ8NH89 298 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 MTERF3Q96E29 417 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 F2RL3Q96RI0 385 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 MENTQ9BUN1 341 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 RIBC2Q9H4K1 309 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
MSH5-202ENST00000375740 NUMA1Q14980 2115 aa13.32□□□□□ -0.28
MSH5-202ENST00000375740 FEZF1A0PJY2 475 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 FAM172BPA6NC97 362 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 RFXAPO00287 272 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 RTCAO00442 366 aaKnown RBP13.31□□□□□ -0.28
MSH5-202ENST00000375740 BCKDKO14874 412 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 KRT8P05787 483 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 ITGAMP11215 1152 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 C5AR1P21730 350 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 SEC13P55735 322 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 IL5RAQ01344 420 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 ENPP2Q13822 863 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 TEAD4Q15561 434 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 ATAD3CQ5T2N8 411 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 NXNL2Q5VZ03 156 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 KDM4DQ6B0I6 523 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 SIGIRRQ6IA17 410 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 FAM180BQ6P0A1 224 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 SLC38A6Q8IZM9 456 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 ASCC1Q8N9N2 400 aaKnown RBP13.31□□□□□ -0.28
MSH5-202ENST00000375740 OR52N2Q8NGI0 321 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 DOHHQ9BU89 302 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
MSH5-202ENST00000375740 SLC6A16Q9GZN6 736 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 C6orf62Q9GZU0 229 aaPredicted RBP13.31□□□□□ -0.28
MSH5-202ENST00000375740 RHBGQ9H310 441 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 REEP1Q9H902 201 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 DDX28Q9NUL7 540 aaKnown RBP13.31□□□□□ -0.28
MSH5-202ENST00000375740 TAS2R9Q9NYW1 312 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 OSGIN1Q9UJX0 560 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 DOCK8Q8NF50 2099 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 PLXND1Q9Y4D7 1925 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 PRR23AA6NEV1 266 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 H7BY64 318 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 PLPP1O14494 284 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 SLC35G4P0C7Q5 338 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 CYP4B1P13584 511 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 RYKP34925 604 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 TIE1P35590 1138 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 HSD17B2P37059 387 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 ITGA1P56199 1179 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 SELENOWP63302 87 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 IL18R1Q13478 541 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 DEPDC4Q8N2C3 294 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 FGF14Q92915 247 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 PRAP1Q96NZ9 151 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 MYOCQ99972 504 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 AIF1LQ9BQI0 150 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 WDR26Q9H7D7 661 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 PELI2Q9HAT8 420 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 C1GALT1Q9NS00 363 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 AHSPQ9NZD4 102 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 TAAR2Q9P1P5 351 aa13.31□□□□□ -0.28
MSH5-202ENST00000375740 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms