RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 TRIB3Q96RU7 358 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 TSSK6Q9BXA6 273 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 ZYG11BQ9C0D3 744 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 C11orf16Q9NQ32 467 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 PRDM5Q9NQX1 630 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-201ENST00000368686 SCP2D1Q9UJQ7 156 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 NUP214P35658 2090 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-201ENST00000368686 DOCK4Q8N1I0 1966 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 PEX10O60683 326 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 SCN2BO60939 215 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 CLDN9O95484 217 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 FGF9P31371 208 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-201ENST00000368686 MC4RP32245 332 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 CAV3P56539 151 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 WNT3P56703 355 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 RPS25P62851 125 aaKnown RBP17.13■□□□□ 0.33
CHTOP-201ENST00000368686 CAMK1Q14012 370 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 TMIGD1Q6UXZ0 262 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 FAM92BQ6ZTR7 304 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 KIAA0907Q7Z7F0 614 aaPredicted RBP17.13■□□□□ 0.33
CHTOP-201ENST00000368686 ST8SIA2Q92186 375 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 PIP5K1AQ99755 562 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 ACER3Q9NUN7 267 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 TRPM5Q9NZQ8 1165 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 HCN2Q9UL51 889 aa17.13■□□□□ 0.33
CHTOP-201ENST00000368686 DSPPQ9NZW4 1301 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 MEIKINA0A087WXM9 373 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 IQCF5A8MTL0 148 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 GPR182O15218 404 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 PRMT3O60678 531 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 CXCL3P19876 107 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 MAOBP27338 520 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 OR1E2P47887 323 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 AVPR1BP47901 424 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 GPR85P60893 370 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 ELOAQ14241 798 aaKnown RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 CYP27C1Q4G0S4 372 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 NHLRC3Q5JS37 347 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 CSGALNACT1Q8TDX6 532 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 SLC39A1Q9NY26 324 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 HCN3Q9P1Z3 774 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 EXO1Q9UQ84 846 aaKnown RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 CASC3O15234 703 aaKnown RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 GCM2O75603 506 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 GADD45GO95257 159 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 RAB36O95755 333 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 GSTM5P46439 218 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 CTBP2P56545 445 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 DCDC1P59894 354 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 C2orf80Q0P641 193 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 TTLL4Q14679 1199 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 CPSF6Q16630 551 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 ZRANB3Q5FWF4 1079 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 DGLUCYQ7Z3D6 616 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 STK40Q8N2I9 435 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 ARRDC4Q8NCT1 418 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 MAL2Q969L2 176 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 AHCYL2Q96HN2 611 aaKnown RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 GJD4Q96KN9 370 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 SLC6A18Q96N87 628 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 ZNF436Q9C0F3 470 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 NUDT15Q9NV35 164 aa17.12■□□□□ 0.33
CHTOP-201ENST00000368686 NOSIPQ9Y314 301 aaKnown RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 SF3B6Q9Y3B4 125 aaKnown RBP17.12■□□□□ 0.33
CHTOP-201ENST00000368686 PLXNB2O15031 1838 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 TNS1Q9HBL0 1735 aaKnown RBP17.11■□□□□ 0.33
CHTOP-201ENST00000368686 A8MXK9 166 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 PAHP00439 452 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 GASTP01350 101 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 OPN1SWP03999 348 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 ITGALP20701 1170 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 HOXA1P49639 335 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-201ENST00000368686 RGNQ15493 299 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 UGT8Q16880 541 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 IFNL1Q8IU54 200 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 CLECL1Q8IZS7 167 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 CLRN3Q8NCR9 226 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 OR8J2Q8NGG1 315 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 SMG7Q92540 1137 aaKnown RBP17.11■□□□□ 0.33
CHTOP-201ENST00000368686 COPS8Q99627 209 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 C1QTNF6Q9BXI9 259 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 MS4A7Q9GZW8 240 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-201ENST00000368686 ABCG5Q9H222 651 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 SAV1Q9H4B6 383 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-201ENST00000368686 DLL4Q9NR61 685 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 HPF1Q9NWY4 346 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 FKBPLQ9UIM3 349 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 YARS2Q9Y2Z4 477 aaKnown RBP17.11■□□□□ 0.33
CHTOP-201ENST00000368686 NUBP2Q9Y5Y2 271 aa17.11■□□□□ 0.33
CHTOP-201ENST00000368686 TRAV6A0A075B6T7 132 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 INPPL1O15357 1258 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 NUPL2O15504 423 aaKnown RBP17.1■□□□□ 0.33
CHTOP-201ENST00000368686 GMDSO60547 372 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 MMP20O60882 483 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 B3GALNT1O75752 331 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 TGM6O95932 706 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 COX7A2P14406 83 aa17.1■□□□□ 0.33
CHTOP-201ENST00000368686 SMPD1P17405 629 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms