RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 KPNA4O00629 521 aaPredicted RBP21.52■■□□□ 1.03
LDB1-201ENST00000361198 ADAM23O75077 832 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 C9P02748 559 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3HP0C7X1 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 RAB28P51157 221 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 NPRL3Q12980 569 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 DGUOKQ16854 277 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3GQ6DHY5 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3CQ6IPX1 549 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TRIM40Q6P9F5 258 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 ADCK2Q7Z695 626 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TBC1D3Q8IZP1 549 aaPredicted RBP21.52■■□□□ 1.03
LDB1-201ENST00000361198 ATG16L2Q8NAA4 619 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 IL17RCQ8NAC3 791 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 OR2A1Q8NGT9 310 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 DYNC2LI1Q8TCX1 351 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 ALPK1Q96QP1 1244 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 EPYCQ99645 322 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 GABRG3Q99928 467 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 NEURL2Q9BR09 285 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 RHNO1Q9BSD3 238 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 TMEM38AQ9H6F2 299 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 CXorf36Q9H7Y0 433 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 SLAMF7Q9NQ25 335 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 DOLKQ9UPQ8 538 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 PADI2Q9Y2J8 665 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 GPSM3Q9Y4H4 160 aa21.52■■□□□ 1.03
LDB1-201ENST00000361198 CAPN5O15484 640 aaPredicted RBP21.51■■□□□ 1.03
LDB1-201ENST00000361198 WBP4O75554 376 aaKnown RBP21.51■■□□□ 1.03
LDB1-201ENST00000361198 TNFRSF1BP20333 461 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 COL9A1P20849 921 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 ALDH9A1P49189 494 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 CSNK2BP67870 215 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 RPP38P78345 283 aaKnown RBP21.51■■□□□ 1.03
LDB1-201ENST00000361198 PRDX1Q06830 199 aaKnown RBP21.51■■□□□ 1.03
LDB1-201ENST00000361198 RBBP4Q09028 425 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 ADAM15Q13444 863 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 PAGE2Q7Z2X7 111 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 RAB42Q8N4Z0 105 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 APOOQ9BUR5 198 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 NT5DC2Q9H857 520 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 SELENONQ9NZV5 590 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 C5AR2Q9P296 337 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 KIF17Q9P2E2 1029 aa21.51■■□□□ 1.03
LDB1-201ENST00000361198 PRAMEF33A0A0G2JMD5 474 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 A0A1W2PQF6 199 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 PRR19A6NJB7 356 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 SLC31A1O15431 190 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 SNRNP200O75643 2136 aaKnown RBP21.5■■□□□ 1.03
LDB1-201ENST00000361198 KRT20P35900 424 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 EEF1A2Q05639 463 aaKnown RBP21.5■■□□□ 1.03
LDB1-201ENST00000361198 FAM20CQ8IXL6 584 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 SPPL2AQ8TCT8 520 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 TAMM41Q96BW9 452 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 HRASLS5Q96KN8 279 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 GABARAPL3Q9BY60 117 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 SNX8Q9Y5X2 465 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 PMF1-BGLAPU3KQ54 211 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 PCDHGA12O60330 932 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 FAM20BO75063 409 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 CDH3P22223 829 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 CDK6Q00534 326 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 RAB30Q15771 203 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 UBE3DQ7Z6J8 389 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 PHF10Q8WUB8 498 aaKnown RBP21.5■■□□□ 1.03
LDB1-201ENST00000361198 RUBCNLQ9H714 662 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 RMI1Q9H9A7 625 aa21.5■■□□□ 1.03
LDB1-201ENST00000361198 PDZK1P1A8MUH7 402 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 TMPRSS11DO60235 418 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 SERPINB7O75635 380 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PSMB9P28065 219 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 RRM2P31350 389 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 GRK3P35626 688 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 VBP1P61758 197 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 TRIM16LQ309B1 348 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 SDE2Q6IQ49 451 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 MFSD4AQ8N468 514 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 AMER3Q8N944 861 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 APH1BQ8WW43 257 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 UBE2FQ969M7 185 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PITHD1Q9GZP4 211 aaPredicted RBP21.49■■□□□ 1.03
LDB1-201ENST00000361198 EPS8L2Q9H6S3 715 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PRDM8Q9NQV8 689 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 NDUFAF4Q9P032 175 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PCDHGB3Q9Y5G1 929 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 BRWD1Q9NSI6 2320 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 TOR1BO14657 336 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PPM1DO15297 605 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 NDUFS4O43181 175 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 NADKO95544 446 aaPredicted RBP21.49■■□□□ 1.03
LDB1-201ENST00000361198 KRT75O95678 551 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 FADS2O95864 444 aaKnown RBP21.49■■□□□ 1.03
LDB1-201ENST00000361198 EGFP01133 1207 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 HOXB2P14652 356 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 UQCRC2P22695 453 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PKLRP30613 574 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 SERPINB1P30740 379 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 OR1E2P47887 323 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 SERPINB10P48595 397 aa21.49■■□□□ 1.03
LDB1-201ENST00000361198 PPP2CBP62714 309 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms