RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ANKHQ9HCJ1 492 aa25.07■■□□□ 1.6
CUEDC1-201ENST00000360238 SIRT3Q9NTG7 399 aaPredicted RBP25.07■■□□□ 1.6
CUEDC1-201ENST00000360238 CKAP5Q14008 2032 aa25.07■■□□□ 1.6
CUEDC1-201ENST00000360238 MYOGP15173 224 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 C21orf33P30042 268 aaPredicted RBP25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 CDC42P60953 191 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 RPS26P62854 115 aaKnown RBP25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 ITGADQ13349 1161 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 EGFLAMQ63HQ2 1017 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 TNFAIP8L2Q6P589 184 aaPredicted RBP25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 TAGAPQ8N103 731 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 AQP11Q8NBQ7 271 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 TMEM19Q96HH6 336 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 BTBD2Q9BX70 525 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 ACSS1Q9NUB1 689 aaPredicted RBP25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 DUSP12Q9UNI6 340 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 PMF1-BGLAPU3KQ54 211 aa25.06■■□□□ 1.6
CUEDC1-201ENST00000360238 EFCAB9A8MZ26 197 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 TOR1BO14657 336 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 PCDH8O95206 1070 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 PUM1Q14671 1186 aaKnown RBP eCLIP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 COLEC12Q5KU26 742 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 GET4Q7L5D6 327 aaPredicted RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 OR6Q1Q8NGQ2 317 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 PSMA8Q8TAA3 256 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 WDR26Q9H7D7 661 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 OSGIN1Q9UJX0 560 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 CACNB4O00305 520 aaPredicted RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 MID1O15344 667 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 KAT7O95251 611 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 GJA4P35212 333 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 LIPAP38571 399 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 TRA2BP62995 288 aaKnown RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 HSPB3Q12988 150 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 ATP1A4Q13733 1029 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 MLC1Q15049 377 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 TBC1D25Q3MII6 688 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 RPS26P11Q5JNZ5 115 aaPredicted RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 ZNF770Q6IQ21 691 aaPredicted RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 C6orf120Q7Z4R8 191 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 PLD3Q8IV08 490 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 LINC01555Q8NAE3 123 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 ST13P5Q8NFI4 369 aaPredicted RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 RPL3LQ92901 407 aaKnown RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 GTPBP3Q969Y2 492 aaKnown RBP25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 COL21A1Q96P44 957 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 FTSJ1Q9UET6 329 aa25.05■■□□□ 1.6
CUEDC1-201ENST00000360238 ANTXRLA6NF34 631 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 M0R082 166 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 TMPRSS11DO60235 418 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 MPZL2O60487 215 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 MFN2O95140 757 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 HNRNPCP07910 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 CST6Q15828 149 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 TIGD6Q17RP2 521 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 SPDYE7PQ495Y7 208 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 FBXO43Q4G163 708 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 FAM92BQ6ZTR7 304 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 MFSD4AQ8N468 514 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 ZHX1-C8orf76Q96EF9 292 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 SLIRPQ9GZT3 109 aaKnown RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 DDX31Q9H8H2 851 aaKnown RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 NMNAT1Q9HAN9 279 aaPredicted RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 SELENONQ9NZV5 590 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 ZAR1LA6NP61 321 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 OR1F1O43749 312 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 CLEC3AO75596 197 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 CSNK1G2P78368 415 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 GPM6BQ13491 265 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 RUNX3Q13761 415 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 PTGES3Q15185 160 aaKnown RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 KIAA1161Q6NSJ0 714 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 KLHL17Q6TDP4 642 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 SNRNP27Q8WVK2 155 aaKnown RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 EXOSC8Q96B26 276 aaKnown RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 RSPH9Q9H1X1 276 aaPredicted RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 MBNL1Q9NR56 388 aaKnown RBP25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 GPR83Q9NYM4 423 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 TAS2R7Q9NYW3 318 aa25.04■■□□□ 1.6
CUEDC1-201ENST00000360238 ADAP00813 363 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 TRIM23P36406 574 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 UGT2B10P36537 528 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 CTSKP43235 329 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 NUDT6P53370 316 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 LIM2P55344 173 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 TUBA1BP68363 451 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 VITQ6UXI7 678 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 TUBA1AQ71U36 451 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 UBE3DQ7Z6J8 389 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 GPR32P1Q8NGA4 272 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 RASSF5Q8WWW0 418 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 ALOXE3Q9BYJ1 711 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 MTIF3Q9H2K0 278 aaKnown RBP25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 AMBNQ9NP70 447 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 TEX10Q9NXF1 929 aaPredicted RBP25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 NINQ8N4C6 2090 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 DOCK9Q9BZ29 2069 aa25.03■■□□□ 1.6
CUEDC1-201ENST00000360238 SH3D21A4FU49 640 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms