RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 KPNA3O00505 521 aaPredicted RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 SDC2P34741 201 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 HOXC5Q00444 222 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 IL18Q14116 193 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 HEPACAMQ14CZ8 416 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 PLEKHS1Q5SXH7 462 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 METTL2BQ6P1Q9 378 aaKnown RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 CACUL1Q86Y37 369 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 GATAD2BQ8WXI9 593 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ALG14Q96F25 216 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 SDHCQ99643 169 aaPredicted RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 CCDC32Q9BV29 185 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 BARHL1Q9BZE3 327 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 RACGAP1Q9H0H5 632 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 C1orf226A1L170 272 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 RFXAPO00287 272 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 IMPA1P29218 277 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 DOC2BQ14184 412 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 GRHL2Q6ISB3 625 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 DDX53Q86TM3 631 aaKnown RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 PHF21AQ96BD5 680 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 NACC2Q96BF6 587 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ITM2BQ9Y287 266 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 KNL1Q8NG31 2342 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 FAM240BA0A1B0GVZ2 78 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 SMLR1H3BR10 107 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ATG13O75143 517 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 SELPP16109 830 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ZNF91Q05481 1191 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ARSIQ5FYB1 569 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ZNF783Q6ZMS7 281 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 LAPTM4BQ86VI4 370 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ATP6V1C2Q8NEY4 427 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 ASB15Q8WXK1 588 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 AP2M1Q96CW1 435 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 FRMD6Q96NE9 622 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 C11orf54Q9H0W9 315 aaPredicted RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 SPATA6Q9NWH7 488 aaPredicted RBP12.74□□□□□ -0.37
NCDN-201ENST00000356090 VWA8A3KMH1 1905 aa12.74□□□□□ -0.37
NCDN-201ENST00000356090 POP4O95707 220 aaKnown RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 CXCR2P25025 360 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 CSTF2P33240 577 aaKnown RBP eCLIP12.73□□□□□ -0.37
NCDN-201ENST00000356090 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 MLLT1Q03111 559 aaPredicted RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 CNTN1Q12860 1018 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 CDKN3Q16667 212 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 MPPE1Q53F39 396 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 RRM2BQ7LG56 351 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 WDR53Q7Z5U6 358 aaPredicted RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 SLC6A16Q9GZN6 736 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 SEC14L4Q9UDX3 406 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 SH2B3Q9UQQ2 575 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 TMEM98Q9Y2Y6 226 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 GPSM3Q9Y4H4 160 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 A3GALT2U3KPV4 340 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 GFYI3L273 518 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 M0R3H8 397 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 MPZL2O60487 215 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 PLOD3O60568 738 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 UGT2B17O75795 530 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 H1F0P07305 194 aaKnown RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 MPC1LP0DKB6 136 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 NR2F6P10588 404 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 RHCEP18577 417 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 PTX3P26022 381 aaPredicted RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 HLA-FP30511 346 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 ZNF630Q2M218 657 aaPredicted RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 DDI2Q5TDH0 399 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 SLC8B1Q6J4K2 584 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 LHFPL3Q86UP9 236 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 SLC9A6Q92581 669 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 TMEM19Q96HH6 336 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 LRR1Q96L50 414 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 MND1Q9BWT6 205 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 HDHD2Q9H0R4 259 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 KCNK12Q9HB15 430 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 SPG21Q9NZD8 308 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
NCDN-201ENST00000356090 RPL36Q9Y3U8 105 aaKnown RBP12.73□□□□□ -0.37
NCDN-201ENST00000356090 GSAPA4D1B5 854 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 RNASET2O00584 256 aaKnown RBP12.72□□□□□ -0.37
NCDN-201ENST00000356090 YES1P07947 543 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 NR2F1P10589 423 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
NCDN-201ENST00000356090 SP140Q13342 867 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 RNASE12Q5GAN4 147 aaKnown RBP12.72□□□□□ -0.37
NCDN-201ENST00000356090 REEP3Q6NUK4 255 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 GDPD4Q6W3E5 623 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 NLRP8Q86W28 1048 aa12.72□□□□□ -0.37
NCDN-201ENST00000356090 NELL2Q99435 816 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms