RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 MAN2A2P49641 1150 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 ZNF763Q0D2J5 394 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 C9orf64Q5T6V5 341 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 C22orf39Q6P5X5 142 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 SLC43A3Q8NBI5 491 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 ZNF461Q8TAF7 563 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 BCL7CQ8WUZ0 217 aaPredicted RBP17.24■□□□□ 0.35
CTSB-202ENST00000353047 XKR8Q9H6D3 395 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 REEP4Q9H6H4 257 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 STOX2Q9P2F5 926 aaPredicted RBP17.24■□□□□ 0.35
CTSB-202ENST00000353047 SLC30A4O14863 429 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 DNAJB5O75953 348 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 NOS3P29474 1203 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 BRAT1Q6PJG6 821 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 CHST9Q7L1S5 443 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 TEX47Q8TBZ9 253 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 APH1BQ8WW43 257 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 LINC01599Q8WXQ3 324 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 TMEM19Q96HH6 336 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 FBXO8Q9NRD0 319 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 CORO2BQ9UQ03 480 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 CMAHPQ9Y471 501 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 CLDN24A6NM45 220 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 PRKRAO75569 313 aaKnown RBP17.24■□□□□ 0.35
CTSB-202ENST00000353047 ABI3BPQ7Z7G0 1075 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 SLC30A8Q8IWU4 369 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 LILRB4Q8NHJ6 448 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 ASB11Q8WXH4 323 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 USP7Q93009 1102 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 HOXD1Q9GZZ0 328 aa17.24■□□□□ 0.35
CTSB-202ENST00000353047 MRPL15Q9P015 296 aaKnown RBP17.24■□□□□ 0.35
CTSB-202ENST00000353047 FAM183AA6NL82 134 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 ANHXE9PGG2 379 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 HYAL3O43820 417 aaPredicted RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 AOC2O75106 756 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 HNMTP50135 292 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 ARPC4P59998 168 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 KCNJ10P78508 379 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 TMEM115Q12893 351 aaPredicted RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 GRIN2CQ14957 1233 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 AMIGO1Q86WK6 493 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 NPAS4Q8IUM7 802 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 Q8N402 240 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 BBS10Q8TAM1 723 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 SMG7Q92540 1137 aaKnown RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 OSGIN1Q9UJX0 560 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 SEMA3DO95025 777 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 POP4O95707 220 aaKnown RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 SRCP12931 536 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 TBCEQ15813 527 aaPredicted RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 LCN1P1Q5VSP4 162 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 HSDL2Q6YN16 418 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■□□□□ 9
CTSB-202ENST00000353047 SNAPC3Q92966 411 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 TMEM80Q96HE8 168 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 CTRCQ99895 268 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 GAL3ST1Q99999 423 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 SEC16AO15027 2179 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 MRPL3P09001 348 aaKnown RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 CD22P20273 847 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 TGFBR2P37173 567 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 SPINT3P49223 89 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 LSM11P83369 360 aaKnown RBP eCLIP17.23■□□□□ 0.353e-6■□□□□ 9.5
CTSB-202ENST00000353047 EIF4EBP2Q13542 120 aaPredicted RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 LRRC32Q14392 662 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 IRAK1BP1Q5VVH5 260 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 IFNL1Q8IU54 200 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 ZNF557Q8N988 423 aaPredicted RBP17.23■□□□□ 0.35
CTSB-202ENST00000353047 KCTD7Q96MP8 289 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 C1QTNF3Q9BXJ4 246 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 ZNF226Q9NYT6 803 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 CCL27Q9Y4X3 112 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 BPTFQ12830 3046 aa17.23■□□□□ 0.35
CTSB-202ENST00000353047 SELPP16109 830 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 DSC1Q08554 894 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 FBXO43Q4G163 708 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 PLAG1Q6DJT9 500 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 GDPD4Q6W3E5 623 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 ELMOD2Q8IZ81 293 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 RAD51AP1Q96B01 352 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 SLC6A16Q9GZN6 736 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 CD160O95971 181 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 YES1P07947 543 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 PRKAR1AP10644 381 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 INSL4Q14641 139 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 TUBA3EQ6PEY2 450 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 ARL9Q6T311 187 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 MACC1Q6ZN28 852 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.22■□□□□ 0.35
CTSB-202ENST00000353047 NELL2Q99435 816 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 CCDC177Q9NQR7 707 aaPredicted RBP17.22■□□□□ 0.35
CTSB-202ENST00000353047 SNX11Q9Y5W9 270 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 RLFQ13129 1914 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 H3BNC9 293 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 PRMT3O60678 531 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 DGKGP49619 791 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 MPPE1Q53F39 396 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 NLRP8Q86W28 1048 aa17.22■□□□□ 0.35
CTSB-202ENST00000353047 SLC37A3Q8NCC5 494 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms