RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 MARVELD3Q96A59 401 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 COQ10AQ96MF6 247 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 ZSWIM3Q96MP5 696 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 TMEM43Q9BTV4 400 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 SORBS1Q9BX66 1292 aaKnown RBP7.3□□□□□ -1.24
BRCA1-201ENST00000352993 NLNQ9BYT8 704 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PADI2Q9Y2J8 665 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 PCDHGB7Q9Y5F8 929 aa7.3□□□□□ -1.24
BRCA1-201ENST00000352993 INSIG1O15503 277 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 EEF1E1O43324 174 aaKnown RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PAHP00439 452 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 IGLV3-25P01717 112 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ATF6P18850 670 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 NNMTP40261 264 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 XKP51811 444 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ABRQ12979 859 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 GPR176Q14439 515 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 RGNQ15493 299 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 TEAD4Q15561 434 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ZNF730Q6ZMV8 503 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 FTMTQ8N4E7 242 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 TEX26Q8N6G2 289 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OR11H4Q8NGC9 324 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PPTC7Q8NI37 304 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 LKAAEAR1Q8TD35 194 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 UFD1Q92890 307 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 MARC2Q969Z3 335 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 C11orf24Q96F05 449 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CMTM7Q96FZ5 175 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 MSLNLQ96KJ4 702 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 GPR137Q96N19 417 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 LINC00052Q96N35 136 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 IFT46Q9NQC8 304 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 SLC35C2Q9NQQ7 365 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ENAMQ9NRM1 1142 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ACSL6Q9UKU0 697 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CLCA2Q9UQC9 943 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OARD1Q9Y530 152 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PCDHB9Q9Y5E1 797 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 TEX13CA0A0J9YWL9 993 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 C2orf92A0A1B0GVN3 265 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 TRBC2A0A5B9 178 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 LGALS8O00214 317 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PRAMEF11O60813 436 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PPM1BO75688 479 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 SEMG1P04279 462 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 TPMTP51580 245 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 NTRK2Q16620 822 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PUS10Q3MIT2 529 aaKnown RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 C19orf48Q6RUI8 117 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 DEF8Q6ZN54 512 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 SYNPOQ8N3V7 929 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ZBTB2Q8N680 514 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 NANOGP1Q8N7R0 232 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PROKR2Q8NFJ6 384 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OR6M1Q8NGM8 313 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OR8K5Q8NH50 307 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 COQ8AQ8NI60 647 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CSGALNACT1Q8TDX6 532 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ASB12Q8WXK4 309 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 NXPE2Q96DL1 559 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PIP5K1AQ99755 562 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 POLR2J3Q9H1A7 115 aaKnown RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 SERHL2Q9H4I8 314 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ELP3Q9H9T3 547 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 SLC22A14Q9Y267 594 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 TSC2P49815 1807 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OTOFQ9HC10 1997 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 RRN3P2A6NIE6 340 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CD8B2A6NJW9 211 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 ANKRD66B4E2M5 251 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 PRRG1O14668 218 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CFDP00746 253 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 IFNW1P05000 195 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 HOXD4P09016 255 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CD8BP10966 210 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CXCL3P19876 107 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 STK19P49842 368 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 RPS7P62081 194 aaKnown RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 IRF8Q02556 426 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 VGLL4Q14135 290 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 COX20Q5RI15 118 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 UBXN11Q5T124 520 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 GCNT6Q5T4J0 391 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 GPR139Q6DWJ6 353 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 IL20RBQ6UXL0 311 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 LINGO4Q6UY18 593 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 LIMS2Q7Z4I7 341 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 LHFPL3Q86UP9 236 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 OR2T35Q8NGX2 323 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 NEIL3Q8TAT5 605 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 USP7Q93009 1102 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 KIAA1143Q96AT1 154 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-201ENST00000352993 CREB3L1Q96BA8 519 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 RNFT2Q96EX2 444 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 C12orf66Q96MD2 445 aa7.29□□□□□ -1.24
BRCA1-201ENST00000352993 HTATIP2Q9BUP3 242 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms