RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 RAB7BQ96AH8 199 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 EMCNQ9ULC0 261 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 MITFO75030 526 aaPredicted RBP15.35■□□□□ 0.05
PTPN11-201ENST00000351677 CYB5AP00167 134 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 GP1BBP13224 206 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 TNFRSF1BP20333 461 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 PRAMEF17Q5VTA0 474 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 NIPAL1Q6NVV3 410 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 GPALPP1Q8IXQ4 340 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 NR4A3Q92570 626 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 HIST1H2AAQ96QV6 131 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 GPRC5BQ9NZH0 403 aa15.35■□□□□ 0.05
PTPN11-201ENST00000351677 LATS1O95835 1130 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 C7P10643 843 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 CLUP10909 449 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 RAB2AP61019 212 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 CES4AQ5XG92 561 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 MDGA1Q8NFP4 955 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 NETO1Q8TDF5 533 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 ZFAND2BQ8WV99 257 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 BEX2Q9BXY8 128 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 RNF121Q9H920 327 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 BEX1Q9HBH7 125 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 SDHAF3Q9NRP4 125 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 RNGTTO60942 597 aaKnown RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 HTR1AP08908 422 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 SRCP12931 536 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 ZNF615Q8N8J6 731 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 FIBINQ8TAL6 211 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 KLHDC7BQ96G42 594 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 MTG2Q9H4K7 406 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 IL26Q9NPH9 171 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 TMEM5Q9Y2B1 443 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 IFT52Q9Y366 437 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 OR1A2Q9Y585 309 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 LOC100509620A0A075B734 347 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 LATO43561 262 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 GALNT1Q10472 559 aaPredicted RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 PUS10Q3MIT2 529 aaKnown RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 TCEAL6Q6IPX3 200 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 LHFPL3Q86UP9 236 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 GALNT12Q8IXK2 581 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 ZNF548Q8NEK5 533 aaPredicted RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 OR51A7Q8NH64 312 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 CLCC1Q96S66 551 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 ABI3Q9P2A4 366 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 C2orf74A8MZ97 194 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 SLITRK5O94991 958 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 PABPC4LP0CB38 370 aaKnown RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 AGXTP21549 392 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 F8A1P23610 371 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 DNM1P34Q6PK57 102 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 C17orf99Q6UX52 265 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 OR8K3Q8NH51 312 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 RIT1Q92963 219 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 SCRN2Q96FV2 425 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 TUBA1CQ9BQE3 449 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 ENAMQ9NRM1 1142 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 LAMP5Q9UJQ1 280 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 NENFQ9UMX5 172 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 PCDHGA2Q9Y5H1 932 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 NPIPB15A6NHN6 443 aaPredicted RBP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 HLCSP50747 726 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.34■□□□□ 0.05
PTPN11-201ENST00000351677 SHKBP1Q8TBC3 707 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 FUZQ9BT04 418 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 MMP27Q9H306 513 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 CYP8B1Q9UNU6 501 aa15.34■□□□□ 0.05
PTPN11-201ENST00000351677 CITO14578 2027 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 ANHXE9PGG2 379 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 GATBO75879 557 aaKnown RBP15.33■□□□□ 0.05
PTPN11-201ENST00000351677 SLC16A8O95907 504 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 PRDX3P30048 256 aaKnown RBP15.33■□□□□ 0.05
PTPN11-201ENST00000351677 APLP1P51693 650 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 C1orf61Q13536 156 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 COQ5Q5HYK3 327 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 TRNP1Q6NT89 227 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 STX12Q86Y82 276 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 ARHGAP12Q8IWW6 846 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 OR4K17Q8NGC6 315 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 MAGIXQ9H6Y5 334 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 C14orf119Q9NWQ9 140 aa15.33■□□□□ 0.05
PTPN11-201ENST00000351677 NWD2Q9ULI1 1742 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 TCRBV21S2A2A0A5A6 115 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 EMC8O43402 210 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 NTHL1P78549 312 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 PIANPQ8IYJ0 282 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 OR8K5Q8NH50 307 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 FEVQ99581 238 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 MED11Q9P086 117 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 BAIAP2Q9UQB8 552 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 SLC1A7O00341 560 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 CRISP1P54107 249 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 DTX3Q8N9I9 347 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 FRS2Q8WU20 508 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 ZBED3Q96IU2 234 aaPredicted RBP15.33■□□□□ 0.04
PTPN11-201ENST00000351677 PRTFDC1Q9NRG1 225 aa15.33■□□□□ 0.04
PTPN11-201ENST00000351677 IRS2Q9Y4H2 1338 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms