RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CHERPQ8IWX8 916 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 TSEN15Q8WW01 171 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 KCNN1Q92952 543 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 NT5C3BQ969T7 300 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 CCDC187A0A096LP49 1063 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 PLD2O14939 933 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 ERCC1P07992 297 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 ATXN1LP0C7T5 689 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 CBLP22681 906 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 UFM1P61960 85 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 RIN1Q13671 783 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 ERV3-1Q14264 604 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 IZUMO2Q6UXV1 221 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 TEX26Q8N6G2 289 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 OR51Q1Q8NH59 317 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 GTPBP3Q969Y2 492 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 TPT1P8Q9HAU6 139 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 DHCR7Q9UBM7 475 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 INTS6Q9UL03 887 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 ERGIC3Q9Y282 383 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 BLOC1S5-TXNDC5H3BN57 136 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 RNF13O43567 381 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 PGRP06401 933 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 OR12D1P0DN82 309 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 CKMT2P17540 419 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 AOAHP28039 575 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 PMS2P3Q13401 168 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 DEFB109BQ30KR1 87 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 KIAA0907Q7Z7F0 614 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 TRNT1Q96Q11 434 aaKnown RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 ZNF347Q96SE7 839 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 WDR77Q9BQA1 342 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 OR51V1Q9H2C8 321 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 SERHL2Q9H4I8 314 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 SERHLQ9NQF3 203 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 BOKQ9UMX3 212 aaPredicted RBP12.23□□□□□ -0.45
LIN54-201ENST00000340417 IFT52Q9Y366 437 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 OPN1SWP03999 348 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 PGGT1BP53609 377 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 EPHA5P54756 1037 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 TARDBPQ13148 414 aaKnown RBP eCLIP12.23□□□□□ -0.45
LIN54-201ENST00000340417 KIAA1958Q8N8K9 716 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 OR6K6Q8NGW6 343 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 TBC1D20Q96BZ9 403 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 NXPE2Q96DL1 559 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 CCNB1IP1Q9NPC3 277 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 AGPAT4Q9NRZ5 378 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 ASB6Q9NWX5 421 aa12.23□□□□□ -0.45
LIN54-201ENST00000340417 IGLV3-27P01718 113 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 SPANXN4Q5MJ08 99 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 TCEAL6Q6IPX3 200 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 FIGNL1Q6PIW4 674 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 OPN5Q6U736 354 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 ZNF572Q7Z3I7 529 aaPredicted RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 CAMK2AQ9UQM7 478 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 IRGMA1A4Y4 181 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 RETP07949 1114 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 HSD11B1P28845 292 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 PEX19P40855 299 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 BNIP3Q12983 259 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 PUM1Q14671 1186 aaKnown RBP eCLIP12.22□□□□□ -0.459e-8■■■■■ 32.1
LIN54-201ENST00000340417 KPNB1Q14974 876 aaKnown RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 GPR19Q15760 415 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 FAM180AQ6UWF9 173 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 NEIL2Q969S2 332 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 SH3GL3Q99963 347 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 BCL2L14Q9BZR8 327 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 RPH3AQ9Y2J0 694 aaPredicted RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 GSTK1Q9Y2Q3 226 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 ZNF749O43361 778 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 AK1P00568 194 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 SLC35E2BP0CK96 405 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 GLB1P16278 677 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 GNALP38405 381 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 DNASE1L1P49184 302 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 RFX4Q33E94 735 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 GALNT10Q86SR1 603 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 PRR22Q8IZ63 422 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 PNPLA1Q8N8W4 532 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 BPIFB6Q8NFQ5 453 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 RBP7Q96R05 134 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 PITHD1Q9GZP4 211 aaPredicted RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 CENPMQ9NSP4 180 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 TMEM30AQ9NV96 361 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 POU2F1P14859 743 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 NCK1P16333 377 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 UBE2NP61088 152 aaKnown RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 KRR1Q13601 381 aaKnown RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 STEAP4Q687X5 459 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 HDDC2Q7Z4H3 204 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 NET1Q7Z628 596 aaPredicted RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 AMIGO2Q86SJ2 522 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms